Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1041 ATGACCCATCCTTACTGCACCAATGACTTCAATGGTTGGTTCGACCTCAATTCTCCTTTTACTCTCTCCTCTTCCTCCTCTTCTTCGTCATCATCATCATGCTCCAATCCACCTTTCTATAATTTTCCTTCTACTTATCATGACGGCCCAACTTGCAACTCTGGTATCACTCCTCATCAGTATCGCCAACAATTACCTTCCTCTCCACCTCTAAGAGAACCCCTTCCTCTTCTTGATCTTAGCCCTTCAAGACCTGAAGATCCAGAATCCTCCTGCGCTGCCATGGAAGTTGACAACAAGGACAAAGACTTGGATGATGAAACTGTGACGGTGGCTTTACACTTAGGGCTTCCTGCAATAGATGCAGCTGATTTAGTTTCAGACAAACAAGAAGTCGCCGTTGCCTCTTTGTGTCCATCGAGTGGGATGAATAGGGGTCAGTACTGGATCCCTACTCCTGCTCAGATTCTGATTGGTCCAACGCAGTTCTCGTGTCCTCTTTGCTTCAAGACGTTCAACAGATACAACAACATGCAGGCCTCTTTTGCTGTTGAAGAGACAAAAATGAAAAATTCTATCGTACGACTCATGAGAAGATATAAGTATACTTTTAGTGCTGTCACTTTTGTGCACCTTCAGATGCATATGTGGGGGCATGGATCTGAATATAGAAAGGGGCCAGAGTCCCTAAGGGGAACGCAGCCAACAGCTATGCTTAGGCTGCCTTGCTATTGCTGTGCACCAGGATGCAAGAACAACATTGACCATCCAAGGGCTAAACCCCTCAAAGACTTCAGAACCCTTCAGACCCATTACAAGAGGAAGCATGGAATGAAGCCTTTTATGTGTAGAAAATGCTGCAAAGCATTTGCTGTGAGAGGTGATTGGAGAACACACGAGAAGAACTGTGGTAAGCTCTGGTACTGCTCTTGTGGCTCTGATTTCAAGCATAAGAGATCTCTCAAAGATCATATCAAGGCGTTCGGGCATGGACACACAGCTTATGGAATTGACTCTTTTGATCAAGATGATGAAGCAGGCTCTGAAGTCGAACAAGAAAATGAACTATTCCAGTCGTAA 1080 0.45 MTHPYCTNDFNGWFDLNSPFTLSSSSSSSSSSSCSNPPFYNFPSTYHDGPTCNSGITPHQYRQQLPSSPPLREPLPLLDLSPSRPEDPESSCAAMEVDNKDKDLDDETVTVALHLGLPAIDAADLVSDKQEVAVASLCPSSGMNRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQASFAVEETKMKNSIVRLMRRYKYTFSAVTFVHLQMHMWGHGSEYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGMKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHGHTAYGIDSFDQDDEAGSEVEQENELFQS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1041 359 PANTHER ZINC FINGER PROTEIN WIP2 23 354 IPR043584 GO:0003700|GO:0010468
Dere07g1041 359 MobiDBLite consensus disorder prediction 51 67 - -
Dere07g1041 359 MobiDBLite consensus disorder prediction 51 99 - -
Dere07g1041 359 FunFam Zinc finger protein WIP2 250 332 - -
Dere07g1041 359 Gene3D Classic Zinc Finger 240 330 - -
Dere07g1041 359 SUPERFAMILY beta-beta-alpha zinc fingers 263 301 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1041 Dere-ChrDere07 13858491 13860756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1041 1 352 C2H2 Transcription Factor Family AT1G51220 54.188 1.74e-124 360