Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1032 ATGAAGGAGCTACTATTGAGGCTTCCCTGTTGCTTTCATGCCGCAAGGAGAGCCTACCTTTACTCAATTGAATTCATGAGACCACCCCAGATATCCTATTCACTACCAACATCATCAACTGCCTCGTTTTATGTCATTTTTGCAGTCATTATTATATTCGAACCTAGTGCTCTTACCTATTCTGCAGCAGTGGAGGGTCATGTTGTAATTACTTCAATGATCCAATGTGCTTTTGAGAAGTGGAAATTGTTGTGTGCGCAGTACAACATGAGGAAGCCCGAGTCTGGAAAAAACAACAACAACAAGCTTCGAAAGGGGTTGTGGTCACCTGAAGAAGATGACAAGCTCATGAACTACATGCTAAACAATGGACAAGGTTGTTGGAGTGATGTCGCCAGAAATGCTGGCTTGCAAAGATGTGGCAAAAGTTGTCGCCTTCGCTGGATCAATTACTTGAGGCCTGATCTTAAGCGTGGTGCCTTCTCTCCCCAAGAGGAAGAGCTCATCATCCACTTGCATTCCTTTCTTGGCAACAGATGGTCTCAAATAGCGGCACGCTTACCAGGGCGAACCGACAACGAAATCAAGAATTTCTGGAACTCCACAATAAAGAAAAGGCTCAAGACCATGTCGTCCACCACCACAACCTCACAAAACGCAAGCGAGTCTTCCATATTATCTGAGCCTAATAACAAAGGCCTCAACAACGTCATGGGAGGTTTCATGCCTGTGTTCAGCAATAACATAATTGAGAGGTTGCCTTTGCTTGAGCATGGACTAAACATGCAAGCTTCTGGTGGATTGTTCAACAGTAATGGAGGGCCTTGCTTCACACAAAATGGAGCTGACAACAGTAATAATAATAATGATAATGGGTTTTATATAGAAAATGGAGTGTTTGGGATTGGGAGTGTAAATATTGGAGCAGAAGGGGAGCTGTTTGTGCCTCCTCTTGAGAGTGTTAGCTCTATAACGGATAACCTGAAAGTGGAGAGTAGAGACACTAACGTTCATAGTTACTTTGACAACATAAACAGCATCGTTAATAACTGCAATATTAGCGGCAACAATATTAATAGAGCTGAGAATAGAGGTGGGATGGAGAATCTATTTCAGGAAGAGTTAACTTTGGGAGAGTGGGATTTGGAGGACTTGATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTTTCAAGCTGA 1200 0.4275 MKELLLRLPCCFHAARRAYLYSIEFMRPPQISYSLPTSSTASFYVIFAVIIIFEPSALTYSAAVEGHVVITSMIQCAFEKWKLLCAQYNMRKPESGKNNNNKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSFLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKTMSSTTTTSQNASESSILSEPNNKGLNNVMGGFMPVFSNNIIERLPLLEHGLNMQASGGLFNSNGGPCFTQNGADNSNNNNDNGFYIENGVFGIGSVNIGAEGELFVPPLESVSSITDNLKVESRDTNVHSYFDNINSIVNNCNISGNNINRAENRGGMENLFQEELTLGEWDLEDLMKDVSSFPFLDFSS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1032 399 Gene3D - 102 158 - -
Dere07g1032 399 PANTHER MYB DOMAIN PROTEIN 55 98 315 - -
Dere07g1032 399 Pfam Myb-like DNA-binding domain 105 152 IPR001005 -
Dere07g1032 399 Pfam Myb-like DNA-binding domain 158 201 IPR001005 -
Dere07g1032 399 CDD SANT 108 152 IPR001005 -
Dere07g1032 399 MobiDBLite consensus disorder prediction 209 228 - -
Dere07g1032 399 SMART sant 157 205 IPR001005 -
Dere07g1032 399 SMART sant 104 154 IPR001005 -
Dere07g1032 399 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Dere07g1032 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 207 IPR017930 -
Dere07g1032 399 SUPERFAMILY Homeodomain-like 103 199 IPR009057 -
Dere07g1032 399 Gene3D - 159 229 - -
Dere07g1032 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 152 IPR017930 -
Dere07g1032 399 FunFam Transcription factor MYB46 159 232 - -
Dere07g1032 399 FunFam MYB transcription factor 102 158 - -
Dere07g1032 399 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Dere07g1032 399 CDD SANT 160 200 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1032 Dere-ChrDere07 13787102 13792369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1032 90 394 MYB Transcription Factor Family AT5G12870 48.113 3.09e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g1032 Myb_DNA-binding 5.1e-12 CL0123