Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1017 ATGATCAGTTTGTTCAAGCAAATGGAACATGAGAAAGCACCTGTCCTGGAAGCAAGGTCCATGAGGGAAATAGAGATACCAGTTGCCTCCGAAAGACTTGATGTTCTTCCCATGGCAACAGAGTCATCTTGTAGTTCTGTTTGCCCTTTTTCCCGGCAAGAACATAGTCTCCTAGCATCGGTAGAGTCCTCAAAGTCGTCAAAGAAACTCTGTGGACTCATAATTTTCTATGCAATGGTTATGCTTGTGGAAGTTGTTGGTGGTTTGAAAGCCAACAGCCTAGCTGTCATCAGCGATGCTGCACATTTGCTTTCTGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCATCAGGTTGGGAAGCAACGCCGCATCAGTCTTTTGGATACAATCGCCTTGAGGTTATGGGTGCTCTTTTTTCTGTGCAGTTGATTTGGCTAATATCTGGCTTTTTAATATACGAAGCAGTGGGTAGACTTCGTCACAGAAAAGCCAGGGTAAATGGAATGCTCATGCTTGCAATTGCGGCATTTGGGTTTGTTCTTAACTTAATTATGGTTGTATGGCTTGGTCATGGTCACAGTCATCATCATCATCATCATGATCACAGTCACCATCATCATCATGGCTATGGAGACTCAGATCATGATCATGGGAAGGAGGAGCTACATATTAACATAACGGATGATGAGAAGCTTAATCTGGTTTCAAGTAGTCCTAAGAAAATGAATGTATTGAACATAAATCTGCAAGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAATCTGTTGGGGTGATGATCGCTGGAGCCGTAATTTGGCTTAAACCAAATTGGTTAGTGGTTGACCTAATTTGCACTCTAATATTCTCTGTTATATCTCTAGGTACTACGGTGTCCACGCTCAAGAATATTTATGGCATTCTGATGGAGAGGACACCGAGTGAAATCAATATCATTAAGCTGGAAAATGGCCTCAAGGGGATCAAGGGAGTGCAAGATATTCACGACTTACACGTTTGGGCCATAACAGTTGGGAAAGTTGTTCTTTCTTGTCATGTAGTAGCCGAGCCTAGGATCAGTTCCAGTGATTTACTAGGTAGGATTAGGCATTACTGTGAAAAAACATACAAAATTCATCATGTAACCATTCAAATTGAGTAA 1173 0.4203 MISLFKQMEHEKAPVLEARSMREIEIPVASERLDVLPMATESSCSSVCPFSRQEHSLLASVESSKSSKKLCGLIIFYAMVMLVEVVGGLKANSLAVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVMGALFSVQLIWLISGFLIYEAVGRLRHRKARVNGMLMLAIAAFGFVLNLIMVVWLGHGHSHHHHHHDHSHHHHHGYGDSDHDHGKEELHINITDDEKLNLVSSSPKKMNVLNINLQGAYLHVMADLIQSVGVMIAGAVIWLKPNWLVVDLICTLIFSVISLGTTVSTLKNIYGILMERTPSEINIIKLENGLKGIKGVQDIHDLHVWAITVGKVVLSCHVVAEPRISSSDLLGRIRHYCEKTYKIHHVTIQIE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1017 390 NCBIfam cation diffusion facilitator family transporter 67 390 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Dere07g1017 390 SUPERFAMILY Cation efflux protein transmembrane domain-like 65 314 IPR027469 -
Dere07g1017 390 Pfam Cation efflux family 74 313 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Dere07g1017 390 Gene3D Cation efflux protein transmembrane domain 67 312 IPR027469 -
Dere07g1017 390 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 318 390 IPR036837 -
Dere07g1017 390 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 44 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1017 Dere-ChrDere07 13653673 13654845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1017 8 390 Inorganic Solute Cotransporters AT2G29410 50.900 1.02e-123 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1017 07 13653673 13654845 Dere07g1017 07 13653673 13654845 ECH