Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1008 ATGTATATCATAGTACCACCTGCCCCAGTTCGCGCACATCCGTACATATCTGAAAGCGTCCAAAGCAACAAGCAAATATTGTCTGTTTCCTCCGTTTCGGGTACGATATCAATAATCACTGTTGAACTTTTGAGGCTCTGGAATCAGAATTTGCTATCGGTTTCTATCAGAGAAAGAAAAGGAAAAATGGCAGAGAAAAACATAAGCAGAAGCAACAGGTGGTCTCTTCTGGGCAAGACCGCTCTCGTTACGGGTGGAACTAAGGGAATCGGGTATGCTATTGTGGAGGAGTTGGCAAAGCTTGGGGCTGTTGTACATACTTGCTCTAGGAATGAATCTGAGCTTAATGAATGCTTACAACGATGGACTGCAAAGGGATTTCAAGTTACTGGTTCAGTCTGTGACATGTTGTCACCTGCTCAGAGACAGGATCTCATAACTAAAGTCTCCTCTATATTTCATGGAAAACTCAATATCCTCGTAAACAATGTGGGAACAAACATAAGCAAACAAACCCTGGAATATACAGCTGAAGATTTCTCATTTCTGATCAGTACAAATCTAGAATCTGCATACCACACATGCCAACTTGCACATCCTCTACTGAAATCTTCAGAAGCCGCAAGCATCGTTTTCATATCCTCCATTGCTGGTGTCACATCTATAAGTGGAGGATCCATATATGGTGCGGCAAAAGGAGCGATAAACCAGCTGACCAAGAATTTGGCATGTGAGTGGGCAAAAGACAATATAAGGACTAATTGCGTTGCACCAGGCCCCATTAAGACCCCCCTTTCTGAACCGCACTTAAAAGATGAAAAGCTTTTCCGGAGTGTCATCAGAAGAATCCCTTTACAACGGATTGGAGAGCCGAACGAGGTGTCTTCCATGGTGGCATTCCTCTGCTTACCTGCAGCCTCTTACGTAACGGGACAGACCATATGTGTTGATGGAGGAATCTCAGTGTTTGGTGTTTGA 978 0.4387 MYIIVPPAPVRAHPYISESVQSNKQILSVSSVSGTISIITVELLRLWNQNLLSVSIRERKGKMAEKNISRSNRWSLLGKTALVTGGTKGIGYAIVEELAKLGAVVHTCSRNESELNECLQRWTAKGFQVTGSVCDMLSPAQRQDLITKVSSIFHGKLNILVNNVGTNISKQTLEYTAEDFSFLISTNLESAYHTCQLAHPLLKSSEAASIVFISSIAGVTSISGGSIYGAAKGAINQLTKNLACEWAKDNIRTNCVAPGPIKTPLSEPHLKDEKLFRSVIRRIPLQRIGEPNEVSSMVAFLCLPAASYVTGQTICVDGGISVFGV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1008 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 322 IPR036291 -
Dere07g1008 325 PRINTS Glucose/ribitol dehydrogenase family signature 155 166 IPR002347 -
Dere07g1008 325 PRINTS Glucose/ribitol dehydrogenase family signature 228 247 IPR002347 -
Dere07g1008 325 PRINTS Glucose/ribitol dehydrogenase family signature 284 304 IPR002347 -
Dere07g1008 325 PRINTS Glucose/ribitol dehydrogenase family signature 80 97 IPR002347 -
Dere07g1008 325 PRINTS Glucose/ribitol dehydrogenase family signature 202 218 IPR002347 -
Dere07g1008 325 PRINTS Glucose/ribitol dehydrogenase family signature 249 266 IPR002347 -
Dere07g1008 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 166 IPR002347 -
Dere07g1008 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 216 IPR002347 -
Dere07g1008 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 228 247 IPR002347 -
Dere07g1008 325 Gene3D - 59 324 - -
Dere07g1008 325 PANTHER TROPINONE REDUCTASE 72 322 IPR045000 GO:0016491
Dere07g1008 325 Pfam Enoyl-(Acyl carrier protein) reductase 87 321 - -
Dere07g1008 325 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 215 243 IPR020904 GO:0016491
Dere07g1008 325 FunFam Short-chain dehydrogenase reductase 63 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1008 Dere-ChrDere07 13583082 13586075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1008 64 324 Miscellaneous Gene Families AT2G29150 63.218 1.93e-117 338