Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0997 ATGGGGGAGGAGGTGAAGATGACCGACTACGACGGGGCTGCCGCTGACGATGATGATAGAGTGCTGGAATGGGAGCTCGGTCTTCCTACTGCCGATGATCTCACTTCTCTCTCTCAGCCCTTGATCCCGCCTGAGCTCGCCTCTGCCTTCAGCATCTCGCCGGAGCCCTGCAGGACAGTCCTCGACGTTAATCGTGCTTCGCAGAATACTCTGTCGAGTCTCCGCGGCGGAAGTTCTCAGGCCTTTTCGTCCAACAATTTCAAGTCGTTCAACGATGACCGGAGTCGGGACCCCATCGTGGTGGAAGGCGATGAAGAGGCTGAGGCTGATCGAGATGGGTCGGGTTCCGACTCTAGGAAACTCAGGAAGATTGATTGCACAGAAGAAGCTGATTCGGTTTTGCGCACTGAGAATTCGACGGATGATCCATCTGCTCGGACCTTGAAGCGGCCCCGGCTCGTATGGACTCCGCAGTTGCACAAGCGTTTTGTGGATGTGGTGGCTCACCTGGGAATCAAGAACGCGGTGCCGAAGACGATTATGCAATTGATGAACGTCGAAGGTTTGACCCGAGAAAATGTCGCTAGCCATCTTCAGAAGTATCGGCTTTACTTGAAGAGAATGCAGGGTTTGTCCAACGAGGGTCCTTCATCGTCGGACCAGCTCTTCGCATCCACTCCTGTGCCCCAGAGCTTACACGAGTCTGGTGGAAGTGGGCATTCTCATGGAAATGGCCATCTTCCGGTCCCTATTCCGATGCCATATCCACCGCCGATGATGCACATGCCGGTTCTTGGGATGTCCCCCGGTCATGGTCATCCACATGCTCACATGGGAATGCCGGTGGCTAATAATGGCTTCGAGTCTCATCCATATAACATGTTGCAACAAAGGAATTGGTCAGGCAATAAATATGGTTCGGTTGTATCATACCCTCACGTTACTACTAATAATAAATGA 960 0.5292 MGEEVKMTDYDGAAADDDDRVLEWELGLPTADDLTSLSQPLIPPELASAFSISPEPCRTVLDVNRASQNTLSSLRGGSSQAFSSNNFKSFNDDRSRDPIVVEGDEEAEADRDGSGSDSRKLRKIDCTEEADSVLRTENSTDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESGGSGHSHGNGHLPVPIPMPYPPPMMHMPVLGMSPGHGHPHAHMGMPVANNGFESHPYNMLQQRNWSGNKYGSVVSYPHVTTNNK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0997 319 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 282 IPR044841 GO:0003700|GO:0006355
Dere07g0997 319 SUPERFAMILY Homeodomain-like 147 207 IPR009057 -
Dere07g0997 319 FunFam Two-component response regulator 146 209 - -
Dere07g0997 319 MobiDBLite consensus disorder prediction 211 238 - -
Dere07g0997 319 MobiDBLite consensus disorder prediction 71 123 - -
Dere07g0997 319 NCBIfam myb-like DNA-binding domain, SHAQKYF class 151 203 IPR006447 GO:0003677
Dere07g0997 319 Pfam Myb-like DNA-binding domain 154 202 IPR001005 -
Dere07g0997 319 Gene3D - 147 209 - -
Dere07g0997 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 206 IPR017930 -
Dere07g0997 319 MobiDBLite consensus disorder prediction 71 89 - -
Dere07g0997 319 MobiDBLite consensus disorder prediction 211 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0997 Dere-ChrDere07 13469197 13470156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0997 1 277 G2-like Transcription Factor Family AT3G46640 57.807 1.35e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere07g0997 Myb_DNA-binding 1.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0997 07 13469197 13470156 Dere07g0997 07 13469197 13470156 ECH