Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0994 ATGAGTTTCGTTTTCCGCGGGAGTAGAGGAGATATCGAAAGTGGATATACAGAATATGTTCCCGAAAGAACCACATTGCGTGTTCATCCAGCTCGGCCAGTAAATAGCAATACTCTTGCTTTTCTCATAACAGTCATCTTGCTATTCATGATATTGAACTCTCCCCATATGTCACATTATTTTCTGATGTGGCTTGTGCTAGCTGTGTTTGTGATGGCTACAAGTCTGAGGATGTATGCAACTTGCCAACAACTTCAAGCTCAAGCAAGGGCTCATGCTGCAGCAGCTACTGGTATGCTTGGCCATACTGAATTACGACTTCACGTGCCACCATCAATAGCAATTGCAACCAGAGGACGCTTGCAAGGACTAAGACTTCAGCTTGCACTTCTGGACCGTGAATTTGATGAACTAGACTATGACACTTTGAGGGCTCTGGACTCTGACACAGCTTCTTCTACTACTTCGATGACTGAGGAAGAAATAAATGCGTTGCCTGTCCACACGTATAAAGTTGCAGGCCCAAGAAAGGATGGTTCAGCAGGGTTGGCATCCTCTTCACGCGCAACTGAGATTAAACAAGACAATGGAGGAACTGAAGGAAATGTAAAGGGTCCAGAAGATGAGCTAACATGTACCATTTGCTTGGAGCAAGTTAACAGGGGGGAGCTGCTTCGTAGTTTGCCATGTTTGCATCAGTTTCATACGAACTGCATCGATCCATGGCTCCGGCAACAAGCAACATGCCCCGTGTGTAAATTTAAGATGGGGTCGGGATGGCGGGGAAACAGGGGGGAGAGTGAGTCCGAAGGTTCTGATATTGTGTAG 828 0.4626 MSFVFRGSRGDIESGYTEYVPERTTLRVHPARPVNSNTLAFLITVILLFMILNSPHMSHYFLMWLVLAVFVMATSLRMYATCQQLQAQARAHAAAATGMLGHTELRLHVPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDSDTASSTTSMTEEEINALPVHTYKVAGPRKDGSAGLASSSRATEIKQDNGGTEGNVKGPEDELTCTICLEQVNRGELLRSLPCLHQFHTNCIDPWLRQQATCPVCKFKMGSGWRGNRGESESEGSDIV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0994 275 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Dere07g0994 275 CDD RING-H2_PA-TM-RING 211 253 - -
Dere07g0994 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 259 IPR013083 -
Dere07g0994 275 SMART ring_2 212 252 IPR001841 -
Dere07g0994 275 Pfam Ring finger domain 211 253 IPR001841 -
Dere07g0994 275 MobiDBLite consensus disorder prediction 176 204 - -
Dere07g0994 275 MobiDBLite consensus disorder prediction 183 197 - -
Dere07g0994 275 SUPERFAMILY RING/U-box 207 256 - -
Dere07g0994 275 PANTHER TARGET OF ERK KINASE MPK-1 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0994 Dere-ChrDere07 13443531 13446170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0994 1 275 C3H Transcription Factor Family AT3G55530 67.754 1.29e-126 359
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0994 07 13443531 13446170 Dere07g0994 07 13443531 13446170 ECH