Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0987 ATGGATACTCTTCTGGAAAACTTTCCTGGTAGCGTAAATGGATTTAGGTTTGAGAATGGTCATATTTCTGTATTTCCAAACCAGAACCCAGTAAACGGGTATGAATTCGATGATAAATCCGTCGATTCATCTAGACTTCCAACCAATTCACAATCTCCGAGTGACTCCGGTCCTTCTTCTAGCCCGAGCTCCAACGAAGAATCTACAGAGAGTAACAAATATTCCAATCCGATTCTCGGATACATAAGTGAAATCCTCATGGATGAAGAAGATGACCTGGAGCGCAAACCTTGCATGTTGCAGGATTGCTTAGCACTCCAGGCTGCTGAAAAATCGTTCTACGATGTCCTCGGTCGTAGTTATCCCTCTTCTCCTCGTCAAATCTCGAATTGCTTCCATGGTGAAAACGTCAATAGCCCAGATGAGAACTTTGGTGGCACCCCTACTTTCGAGAGCAATAGTAGCTATACCACTGATAATTCATCTGACTCCGGTTGGGTTAACGGTGTCGTTAATTCCCCAGAAAACTTCCTCGAGATTTCAGATCTAGCTCCTGATCCATATGGAGAAACCCTCGCTCAGAGCAACCCGCAGATGAATCTAGGGGATACCATGCATAATTCAGGACCCAGAGGAACAAGAGAAAAGAGAAGCCACTGGATGGATTATCCTATAAACGAAGAAGAAGGGAGAGGCACCAAAATATCTGCCGTCTATTCATATGATTCAGAGCCGTCGGATATGTTTGATGAAGTAATGCTGTGTTATCATGGAACTAGTCAATCCACGGCATGTTCTGGTCCTGAACAAAATGGCATATTCCATCTGAATGTTGACTCCTCCGGAGGATCAAACGGGAAGCCAGTGCGTCCAAAGAAAGGAGCTAACAAAGGTACAATGGTAGATTTATGGACTCTACTAACCCAATGTGCTCAAGCTGTGGCAAGCTATGACCAACGGAATGCCAATGAACTTCTCAAGCAGATTAGGCAGCATTCTTCCCCTTTTGGCGATGGAATCGAACGTTTAGCTCATTACTTTGCCAATAGCCTTGAGACACGTTTGGCTGCAGGGACACCATCATATAACCCCACTGATTGCAATGGGGCAACTGCTGCTGAGATATTAAAAGCTTACAAGCTATACATCACAACATCTCCTTTCCTTAGGATTTCGCATTTCTTGGCTAACAGAACTATTTTGAAGCTAGTAGAAGGTGGAACCAACCTTCATATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCATTATCCAGCGCCTTTCAGAAAGGAAAGGCGGTCCTCCCAAGCTTCGCATAACAGGAATTGAATTTCCTCAGTCAGGGTTTCGGCCCGCAGAGAGGGTTGAGGAGACAGGACGAAGGATAGCAAATTACTGCAGGAGGTTCAATGTCCCTTTCGAATACAATTGCTTGGCACAGAAATGGGAAACCATCAAGCTGGAGGATCTCAAAATCGACAGAGCTGAAATAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGCCTGATGAAACTGTGTCTGTCAACAGTCCAAGAGATGCTGTTTTGAAGCTAATAAGGAAGATCAACCCAAATATGTTCATACATGGGATTGTCAATGGCACTTATAATGCACCTTTTTTCGTCACACGGTTCAGGGAGGCTTTGTTTCATTACTCATCTTTGTTTGATATGTTTGAGGCCATTGTGCCTCGAGAAGATCCTGAGAGGTTGCTGTTTGAGAAAGGGATATTTGGAAGGGACGCCATGAATGTTATAGCGTGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAAGTTAGGAATCGTAGAGCTGGGCTCAAGCAACTCCGATTGGATTCAGAACTCTTCAATAGAGCCAAAGAAATGGTGAAGACGGAATATCATAGAGATTTTGTTGTGGATGAGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTATTCATGCTCTTTCTTGCTGGAAACCTGCTTAA 2028 0.4428 MDTLLENFPGSVNGFRFENGHISVFPNQNPVNGYEFDDKSVDSSRLPTNSQSPSDSGPSSSPSSNEESTESNKYSNPILGYISEILMDEEDDLERKPCMLQDCLALQAAEKSFYDVLGRSYPSSPRQISNCFHGENVNSPDENFGGTPTFESNSSYTTDNSSDSGWVNGVVNSPENFLEISDLAPDPYGETLAQSNPQMNLGDTMHNSGPRGTREKRSHWMDYPINEEEGRGTKISAVYSYDSEPSDMFDEVMLCYHGTSQSTACSGPEQNGIFHLNVDSSGGSNGKPVRPKKGANKGTMVDLWTLLTQCAQAVASYDQRNANELLKQIRQHSSPFGDGIERLAHYFANSLETRLAAGTPSYNPTDCNGATAAEILKAYKLYITTSPFLRISHFLANRTILKLVEGGTNLHIIDFGICYGFQWPCIIQRLSERKGGPPKLRITGIEFPQSGFRPAERVEETGRRIANYCRRFNVPFEYNCLAQKWETIKLEDLKIDRAEITVVNCLYRLKNLPDETVSVNSPRDAVLKLIRKINPNMFIHGIVNGTYNAPFFVTRFREALFHYSSLFDMFEAIVPREDPERLLFEKGIFGRDAMNVIACEGAERVERPETYKQWQVRNRRAGLKQLRLDSELFNRAKEMVKTEYHRDFVVDEDGKWVLQGWKGRIIHALSCWKPA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0987 675 MobiDBLite consensus disorder prediction 43 74 - -
Dere07g0987 675 MobiDBLite consensus disorder prediction 33 74 - -
Dere07g0987 675 MobiDBLite consensus disorder prediction 193 216 - -
Dere07g0987 675 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 217 663 IPR005202 -
Dere07g0987 675 Pfam GRAS domain family 305 673 IPR005202 -
Dere07g0987 675 MobiDBLite consensus disorder prediction 193 207 - -
Dere07g0987 675 ProSiteProfiles GRAS family profile. 294 673 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0987 Dere-ChrDere07 13374651 13376678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0987 1 674 GRAS Transcription Factor Family AT2G29060 44.622 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere07g0987 GRAS 1.3e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0987 07 13374651 13376678 Dere08g1220 08 16318192 16321276 CCT
Dere07g0987 07 13374651 13376678 Dere07g0987 07 13374651 13376678 ECH