Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0976 ATGAAGTGCTTCTATTTCTCAAACGGGGAAAGGCAGGAAGACGAAGACGGCGTCGTTTGCAGAGCTTCCAATTCCAGAGTCTCGTGGGCTCGCTCTCTCAGCATCGCTTCCAGTAGTATAGACACCAGGAGGTCCGAATTTGACGCAGAGTCCAGGAATTTTTCTGATACCGTTGGGTTTCATGAGTTCTTGTCTCAGAGGCGAGCCAATGATCTGCGCGTGTTTTCACTCTCCGAGCTTAAATCTGCAACGCGCGGGTTCAGTAGAGCGCTCTTGATTGGGGAAGGTGGGTTTGGTTGTGTGTACAGAGGAGTAGTCAAGGTACCCAATGAGGATGCGAATTCGAAGATGGATGTTGCAATCAAGCAGTTGAATCCATTTGCAGTGATTGATGGCAAAGGGCATAAGGAGTGGATTAATGAGGTGAACTTGTTAGGTGTAGTCAATCATCCGAATCTGGTCAAGTTAATAGGATATTGTGCAGAAGATGATGAAAGAGGGATTCAACGACTTTTGGTCTATGAGCTTATGCGAAATAAAAGCTTGGAAGACCATCTTTTGGCTCGAGTACCATCAACACTCACATGGATGGCAAGATTAAAAGTTGCTCAAGACGCAGCCCGTGGGTTGGCGTACCTGCATGAAGAAATGGATTTTCAGGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTATGTTCACACTGACCCAAGACTTGAAGGACAGTACTGCATCAAATCAGTTCAAGTACTAGCGACCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCCCGTCCTAAAATGAGTGAGGTGGTTGAGATCCTTGGGAATATCATTACTGAGACTGTTTCTCAGGATGAATACATCCCTCAAGCTGTTGATGAGGCAACTGGGGAAGAAAAAGAAGACAAGTTCTCTCTTGAGGAAGCAGAAGCTGAATCAGTCAAGCAGGGGAATAGTTATCTGAAGAAGATCTTTGATTTAAGAGAAATGGTCAGCTTAAGAAACAAGTCTATTGGAAGGTTAGATTGGAAAAATTGGGCACCTGGGTTGGGTTTGGTTTCTGGAGAATTAAGCAATGAGCAGATGATAGCGTAA 1101 0.4514 MKCFYFSNGERQEDEDGVVCRASNSRVSWARSLSIASSSIDTRRSEFDAESRNFSDTVGFHEFLSQRRANDLRVFSLSELKSATRGFSRALLIGEGGFGCVYRGVVKVPNEDANSKMDVAIKQLNPFAVIDGKGHKEWINEVNLLGVVNHPNLVKLIGYCAEDDERGIQRLLVYELMRNKSLEDHLLARVPSTLTWMARLKVAQDAARGLAYLHEEMDFQVVGTIGYAAPEYVHTDPRLEGQYCIKSVQVLATLANKCLMKQPKSRPKMSEVVEILGNIITETVSQDEYIPQAVDEATGEEKEDKFSLEEAEAESVKQGNSYLKKIFDLREMVSLRNKSIGRLDWKNWAPGLGLVSGELSNEQMIA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0976 366 ProSitePatterns Protein kinases ATP-binding region signature. 93 122 IPR017441 GO:0005524
Dere07g0976 366 Pfam Protein tyrosine and serine/threonine kinase 93 216 IPR001245 GO:0004672|GO:0006468
Dere07g0976 366 Gene3D Phosphorylase Kinase; domain 1 65 176 - -
Dere07g0976 366 SUPERFAMILY Protein kinase-like (PK-like) 69 276 IPR011009 -
Dere07g0976 366 Gene3D Transferase(Phosphotransferase) domain 1 177 220 - -
Dere07g0976 366 Gene3D Transferase(Phosphotransferase) domain 1 233 298 - -
Dere07g0976 366 ProSiteProfiles Protein kinase domain profile. 87 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0976 366 PANTHER OS01G0588500 PROTEIN-RELATED 235 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0976 Dere-ChrDere07 13281418 13285431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0976 73 247 Glycoside Hydrolase AT3G07070 38.532 2.89e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere07g0976 PK_Tyr_Ser-Thr 1.5e-19 CL0016