Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0975 ATGGGAATTTGTCTGAGCGCCCAAATCAAAGCCGAGAGCCAATGTTTCACAGGGCCAAATTCAAAACATGTGAGCACAGATGGTAATGATCTGAGCAGTACAGGTAGTAAGGACTCCACGGCCTCAGTGCCTCATAATCCTCGGAGTGAGGGTGAGATTTTGCAGTCGTCCAATTTGAAGAGCTTTACTTTGTCAGAACTTAAGGCAGCCACACGAAACTTTCGTCCAGATAGTGTTTTAGGAGAAGGAGGTTTTGGATCAGTTTTTAAGGGGTGGATTGATGAGAATTCACTGGCTCCTTCCAAGCCTGGCATTGGCATAATCGTTGCTGTGAAAAGACTTAATCAAGATAGTAGCCAAGGTCACAACGAGTGGTTGGCTGAAGTGAATTATCTTGGACAATTTTCTCATCCCCATCTTGTAAAATTGATTGGGTATTGCCTCGAAGACGAACACCGCCTTCTGGTATATGAATTTATGCCCCGCGGCAGCTTGGAGAATCATTTGTTCAGGAGAGGCTCTTATTTTCAACCTCTTTCTTGGGGCGTCCGTTTAGAGGTCGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTTCATAGTGCCCAAACAAAAGTGATATATAGGGACTTCAAGACTTCAAATATCTTGCTTGACTCAAATTACAATCCAAAACTTTCTGATTTTGGGCTGGCCAAGGATGGACCCGCAGGAGACAAAAGCCATGTGACCACCAGAGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACTGGTCACCTAAGTGCAAAGAGTGATGTGTATAGTTTTGGAGTAGTACTGGTAGAAATGTTATCAGGTCGCCGAGCAATGGACAAGAACCGTCCATCAGGACAGCACAATTTGGCAGAATGGGCTAGGCCATACCTATCCAACAAACGCAAGCTTTCTCGCGTGCTGGATAACCGTCTCGAAAGTCAGTATGACATGGATGAGGCCTATAAGGTGGCTACCCTTGCCTCGCGATGCATTTCCACTGAAGTCAAGCTCAGGCCAAGCATGGACGAGGTCGTTTCAACATTGGAGCAGCTTCAGGTTGCCACTGTAAATGAAAGCAATCAAAAATCTTCTGTTAATAGAAGAAGTGAAGGTGATGCTAACAGTGGAAGGACCACCATAGCTTATCCCCGTCCCACTGCTTCCCCTCTCTATGCTTGA 1203 0.4597 MGICLSAQIKAESQCFTGPNSKHVSTDGNDLSSTGSKDSTASVPHNPRSEGEILQSSNLKSFTLSELKAATRNFRPDSVLGEGGFGSVFKGWIDENSLAPSKPGIGIIVAVKRLNQDSSQGHNEWLAEVNYLGQFSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWGVRLEVALGAAKGLAFLHSAQTKVIYRDFKTSNILLDSNYNPKLSDFGLAKDGPAGDKSHVTTRVMGTYGYAAPEYLATGHLSAKSDVYSFGVVLVEMLSGRRAMDKNRPSGQHNLAEWARPYLSNKRKLSRVLDNRLESQYDMDEAYKVATLASRCISTEVKLRPSMDEVVSTLEQLQVATVNESNQKSSVNRRSEGDANSGRTTIAYPRPTASPLYA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0975 400 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Dere07g0975 400 FunFam Probable serine/threonine-protein kinase PBL8 160 376 - -
Dere07g0975 400 SUPERFAMILY Protein kinase-like (PK-like) 42 356 IPR011009 -
Dere07g0975 400 MobiDBLite consensus disorder prediction 364 400 - -
Dere07g0975 400 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Dere07g0975 400 MobiDBLite consensus disorder prediction 364 390 - -
Dere07g0975 400 PANTHER OS01G0588500 PROTEIN-RELATED 39 360 - -
Dere07g0975 400 MobiDBLite consensus disorder prediction 16 52 - -
Dere07g0975 400 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0975 400 CDD STKc_IRAK 80 359 - -
Dere07g0975 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dere07g0975 400 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Dere07g0975 400 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Dere07g0975 400 Gene3D Transferase(Phosphotransferase) domain 1 160 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0975 Dere-ChrDere07 13278951 13280983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0975 15 362 Glycoside Hydrolase AT3G07070 43.251 5.13e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere07g0975 PK_Tyr_Ser-Thr 1.9e-46 CL0016