Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0969 ATGCTCAGTCAATGCCATTTAATTTCTTTTAATAATTGCTGCTTCCCCCAATTACTAATTGACACTTGGCGGCATCACATTATCAGCAATAAATTCATCGTTGATCTCAATTATATGTCATTTTACAGCTTTTTCAACGACAACTTTGAACATTGTTGGACTACATCATCCTTGGCTAAGTCTGCAGGTGGAAGCCACACGTTATCGATTGGAGTCAGTGCAAAAGTCAAGCCTTCCTGTTTGGAAGAAAGCAAGACATGGTCCCAGAAAATCCAACCCGATGCTGCAATTTCCCTTCCTGTCCCACTTCTTCTCAAGGCTCTGCTTATGGAGATCTTGAAGCCTTCGCATCCTCCTCACCTATATGTAGCCACCGGAGATGCCTTTTATGGCTTCTCGCCACCGCTGACTCTACCCCTTGCCGCCGCCTCTCAACTACCCCACGCTATGGCAGAATGTGCAGAGACGGTGCATGTAGCTCTCGGAAAGTCGGTCGACAAAGCTGTGAATTTGCTTCAATGGACTTTCAGCCACTTTAAGAGCTCACAGATTTGCATACTCCATGTTCATCAACCTTCCTCTATGATCCCCACTCTCTTAGGAAAATTGCCGGCAACCCAAGCAAATCCTGAAGTCGTGTCCGCTTTTAGAAGAGAGGAAAGGGAACAGACCTCGAGGCTTTTGGAAAATTACGTGAGCATTTGCCGTGCAGCTAAGGTTCAGGCAACAAGCGTCATAGCCGAAGCTGACCAAGTGCAGAAAGGGATTGTTGATTTAATTGTCAGGCATGGTATTAGGAAGCTTGTTATAGGAGCAGTGCCAGAAAATTGCAAGAAGGTGAAAAGGAATTCCAAAAAAGCAAACTATGCTGCCAAGAACGCCCCTCCATTCTGTGAAATATGGTTTATCCACAAAGGTAAACACATATGGACAAGAGAAGCTTCTGAAAACCCTTGTTCTTTGTCTTCACATGCTCAACCTGAGATTGCAGCCTCAGACAGCTTGAGAACTAGATCATTTCAATATGGTAAGAGTGAATTGTTTCAATCAGAGTGTCTTCGGTCAAATTCTGCAAGAACTGCAATCTGTACTGGAATTGGTAGTTGGTCTCAGAGTGAAATCCTTGAAACAGATGCAACTTCTTCATCCAAATCGTCCAGTTGTACCAGTCAATGTTCTCCCCAAAATTCTGCCGGGTGGTATTTAGAGACTTATTCAGATGTTGAGGAGGAAAGAGTTCGTAGTCAACTTACTGAAGCCAAACTAGAAGTTGAGGCTGTGACAAACAAGGCTTTTGCTGAGCTTTTGAAATGTAAAAGTTTGGAAGAAGAAGCTATGGAGGCCATAAGGAAGGTCAATATGCTTGAATCTGCCTATGCATCTGAAGTAAAGCTAAGAAGGGAGGCAGAGGATGCGTTCAGGGCCACAGTACAGGAGCAACAAAAGCTCTTGGATGAGAGTGCAGAAGTTGCTAGTTTGCTGCAGAGGACCATGAGAAATATTGCCCTTCTGGACAATAGTGCACAGGAAGCAAACCGTAGGCGAGATGAAGCTGCAGATGAGCTATTATTAATTCAAGCATCCATGTCAACCCTGTGGCATGAAAAGCAGCAGATCAGACGACAAAAAATGGAAGCCCTCCACTGGCTTGAGCGGTGGAAAAGTCGTGGACAAGTTGGAGCTGCACACTGCCATGGGGTCATTGGATTTGCTGAAGAATTACCAGAGTTGGCAGAATTTTCGTTGTCAGATCTTCAAAATGCTACATGCAATTTTTCTGAGAGCTTCAAAATTGCACAGGGAGGATATGGTTGTATATATAAGGGGGAAATGCTGGGTAGGACTGTTGCAATAAGGAAGCTACATCCACATAACATGCAGGGACCATCTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTCCAGCACCCTCATCTATTGACATTGCTGGGTGTTTGCCCTGAAGCCTGGTCACTTGTATATGAGTACTTGCCCAATGGGAGTCTTCAAGACCACCTATTCCGAAAGAACAACAATTCCCCTCTGACATGGAATAGCCGGGCACGTATGATCGCTGAAATTGCTAGCGCTCTTTGCTTTTTACACACTTCCAAACCTAAAACTATTGTCCATGGTGTTCTAAAGCCTGAAATTATACTTCTTGATTCTGTGCTTAGTTGCAAGATATGTGAATTCGGGTTCTGCAGGCTGATGACAGAGGAGTCACTCTATCGTCCTAGTTTCAGCTTTAGCACTGACCCAAAGGGTACTTCTGCATATACAGATCCAGAGTTTCAGAGAACTGGAATACTAACACCCAAGTCTGATATCTACTCTTTTGGACTCATCATTTTGCAACTCCTCACTGGTAGGACTATTCCAGTTGGGTTAGCAGGTGAAGTACGCAAGGCAGTTTCATGTGGAAAATTGTTGTCAATTCTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCAACAAGATTGGTTGAACTGGGACTGCAATGCTGTCAACAAAACGGTAGAGACAGACCAGAGCTAACACCTACTTCGGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGACCGACCAGTGCCATCTTTTTTCCTGTGTCCCATCCTTCAGGAGATAATGCGTGATCCTCAGGTTGCAGCAGATGGATTCACTTATGAAGGGGAAGCCATACGAGAATGGCTGAAAAACGGGCATGAAACTTCACCCATGACTAATTTAAAATTGAGTCACCTGCATCTTACTCCCAATCATGCACTTCGTCTTGCGATCCAAGATTGGCTTTGCAAATCCTGA 2814 0.4453 MLSQCHLISFNNCCFPQLLIDTWRHHIISNKFIVDLNYMSFYSFFNDNFEHCWTTSSLAKSAGGSHTLSIGVSAKVKPSCLEESKTWSQKIQPDAAISLPVPLLLKALLMEILKPSHPPHLYVATGDAFYGFSPPLTLPLAAASQLPHAMAECAETVHVALGKSVDKAVNLLQWTFSHFKSSQICILHVHQPSSMIPTLLGKLPATQANPEVVSAFRREEREQTSRLLENYVSICRAAKVQATSVIAEADQVQKGIVDLIVRHGIRKLVIGAVPENCKKVKRNSKKANYAAKNAPPFCEIWFIHKGKHIWTREASENPCSLSSHAQPEIAASDSLRTRSFQYGKSELFQSECLRSNSARTAICTGIGSWSQSEILETDATSSSKSSSCTSQCSPQNSAGWYLETYSDVEEERVRSQLTEAKLEVEAVTNKAFAELLKCKSLEEEAMEAIRKVNMLESAYASEVKLRREAEDAFRATVQEQQKLLDESAEVASLLQRTMRNIALLDNSAQEANRRRDEAADELLLIQASMSTLWHEKQQIRRQKMEALHWLERWKSRGQVGAAHCHGVIGFAEELPELAEFSLSDLQNATCNFSESFKIAQGGYGCIYKGEMLGRTVAIRKLHPHNMQGPSEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDHLFRKNNNSPLTWNSRARMIAEIASALCFLHTSKPKTIVHGVLKPEIILLDSVLSCKICEFGFCRLMTEESLYRPSFSFSTDPKGTSAYTDPEFQRTGILTPKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLLSILDSSAGEWPPAVATRLVELGLQCCQQNGRDRPELTPTSVRELEQLHVSEDRPVPSFFLCPILQEIMRDPQVAADGFTYEGEAIREWLKNGHETSPMTNLKLSHLHLTPNHALRLAIQDWLCKS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0969 937 CDD RING-Ubox_WDSUB1-like 868 923 - -
Dere07g0969 937 CDD STK_N 156 306 - -
Dere07g0969 937 Gene3D Transferase(Phosphotransferase) domain 1 665 866 - -
Dere07g0969 937 ProSiteProfiles U-box domain profile. 866 937 IPR003613 GO:0004842|GO:0016567
Dere07g0969 937 ProSiteProfiles Protein kinase domain profile. 592 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0969 937 Pfam Protein tyrosine and serine/threonine kinase 597 849 IPR001245 GO:0004672|GO:0006468
Dere07g0969 937 Coils Coil 494 521 - -
Dere07g0969 937 Coils Coil 438 458 - -
Dere07g0969 937 PANTHER OS02G0152300 PROTEIN 157 931 - -
Dere07g0969 937 Gene3D Phosphorylase Kinase; domain 1 569 664 - -
Dere07g0969 937 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 158 273 - -
Dere07g0969 937 Coils Coil 410 430 - -
Dere07g0969 937 SUPERFAMILY RING/U-box 864 936 - -
Dere07g0969 937 Gene3D HUPs 149 273 IPR014729 -
Dere07g0969 937 SMART Ubox_2 870 933 IPR003613 GO:0004842|GO:0016567
Dere07g0969 937 SUPERFAMILY Protein kinase-like (PK-like) 576 857 IPR011009 -
Dere07g0969 937 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 867 937 IPR013083 -
Dere07g0969 937 Pfam U-box domain 867 936 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0969 Dere-ChrDere07 13196878 13203834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0969 155 934 U-box Gene Family AT2G45910 38.232 9.53e-177 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere07g0969 PK_Tyr_Ser-Thr 2e-31 CL0016