Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0958 ATGGAGAGCAGCGAGAATGGGTCGAGTGGGAGCAGTGGAGTGGGATCGCGATGGAACCCTACAAAAGAGCAAATAAGCATGTTGGAGAATCTGTATAAGCAGGGGATAAGGACGCCCAGTGCTGAGCAGATACAGCACATCACTGCGAGGCTCAGGGCGTATGGTCACATCGAAGGCAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCCAGGCAGAGGCAGAAGCAAAAGCAAGAAACCATTGCTTACTTCAATCGCTTTCTTCATACATCTCATCATCATCATCAGCCTATTTTCTCTTCCCCCCTCTGCCCCAGTGGTTGTAAAGTTACTTTTCTTTTTTTATTGAGTTCAGTGCTTTGCCCTCCATGTTATCTGCCACACAGTGAAGTGGGGTTTTATGCTCAACATCCAAAAGTGCTTTTGCCTGGATCAGCTATTAGGAGGATTCCCAGAAACTGTACTGAGGCATACCAACAAATGCAAGAGAGAATAATCCCAGATGATAAGCCCTTGAGCCACCAAGAAACGCTTCCACTTTTTCCTCTGCAACCCACTGGCATTCTGGAAGACAAAAGTACTGTTTCTGCTGACGACAGTTCAACTGCTACTCCTTCAGCATCTCCTGATCACCATCATATTGATGGAGAAGATGGCCCGCCAGAAACCCACCCCTTCTTTGATTTTCTTTCTTCTTCAGGTCAAGAATTTCTGCACAGAGAGTGA 729 0.4609 MESSENGSSGSSGVGSRWNPTKEQISMLENLYKQGIRTPSAEQIQHITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHTSHHHHQPIFSSPLCPSGCKVTFLFLLSSVLCPPCYLPHSEVGFYAQHPKVLLPGSAIRRIPRNCTEAYQQMQERIIPDDKPLSHQETLPLFPLQPTGILEDKSTVSADDSSTATPSASPDHHHIDGEDGPPETHPFFDFLSSSGQEFLHRE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0958 242 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 206 IPR044555 GO:0003700|GO:0099402
Dere07g0958 242 SUPERFAMILY Homeodomain-like 10 82 IPR009057 -
Dere07g0958 242 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Dere07g0958 242 FunFam WUSCHEL-related homeobox 4 15 82 - -
Dere07g0958 242 CDD homeodomain 17 77 IPR001356 GO:0003677
Dere07g0958 242 MobiDBLite consensus disorder prediction 194 242 - -
Dere07g0958 242 MobiDBLite consensus disorder prediction 194 209 - -
Dere07g0958 242 SMART HOX_1 13 80 IPR001356 GO:0003677
Dere07g0958 242 Pfam Homeodomain 16 75 IPR001356 GO:0003677
Dere07g0958 242 Gene3D - 15 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0958 Dere-ChrDere07 13130243 13131505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0958 1 232 Wox Gene Family AT5G59340 43.798 7.80e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere07g0958 Homeodomain 6.8e-19 CL0123