Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0953 ATGGCTTCTTCTTCCTCAACCTTCCCTCTCTTACTAGGCATAGCTTCGTTCTTTATTCTCACCACTGTCGCTAACGGCACCATCTTAACGCTCGTCAATAACTGCAACTTCACCGTCTGGCCTGCCATCCAGCCCAACGCCGGCCACCCAGTCCTCGCTCGTGGCGGCTTCGTCCTACACACACTCACCCACATCTCCATACCCGTCCCGGACCGCCACTGGTCGGGTAGGGTCTGGGCCAGAACCAGTTGCGGCTACTCCGGCAACCAATTCCACTGCGTCACCGGCGACTGCGGTGGCCGCCTGGAGTGCAACGGCGCCGGCGGAGCAACTCCGGCTACTCTGGCCCAGTTCAGCATCCACCACGGCGCAAACGACTTCTCCTCTTACGGGGTTAGCCTGGTGGACGGTTTCAACGTCGGCATGACGGTGACGCCACATGAAGGAAAAGGCGTGTGTCCCGTGGTGGGTTGTCGTGCGGATCTGGTTTCCTCATGTCCTGGGGCGTTGCAGCACCGTGTACCGGTCGGCCACGGTCCGGTGGTGGCGTGTAAGAGTGGCTGCGAGGCTTTGGGCACGGACGAGCTGTGCTGTAGGAACCATTACAATAGCCCGCAAATGTGTAAGCCTTCCGTTTATTCTCAGTACTTCAAGCACGCGTGCCCTGATACGTTTACTTTTGCCCACGACAACCCGTTGCTCATGCACGAGTGTTCCTCGCCTCGCGAGCTCAAGGTTATATTTTGCCATTAG 753 0.5843 MASSSSTFPLLLGIASFFILTTVANGTILTLVNNCNFTVWPAIQPNAGHPVLARGGFVLHTLTHISIPVPDRHWSGRVWARTSCGYSGNQFHCVTGDCGGRLECNGAGGATPATLAQFSIHHGANDFSSYGVSLVDGFNVGMTVTPHEGKGVCPVVGCRADLVSSCPGALQHRVPVGHGPVVACKSGCEALGTDELCCRNHYNSPQMCKPSVYSQYFKHACPDTFTFAHDNPLLMHECSSPRELKVIFCH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0953 250 CDD TLP-PA 28 249 - -
Dere07g0953 250 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Dere07g0953 250 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Dere07g0953 250 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Dere07g0953 250 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Dere07g0953 250 SMART tha2 29 250 IPR001938 -
Dere07g0953 250 PANTHER OS03G0233200 PROTEIN 17 249 IPR001938 -
Dere07g0953 250 Gene3D Thaumatin 27 249 IPR037176 -
Dere07g0953 250 Pfam Thaumatin family 33 249 IPR001938 -
Dere07g0953 250 PIRSF PR5 1 250 IPR001938 -
Dere07g0953 250 ProSiteProfiles Thaumatin family profile. 26 250 IPR001938 -
Dere07g0953 250 SUPERFAMILY Osmotin, thaumatin-like protein 28 249 IPR037176 -
Dere07g0953 250 FunFam Osmotin-like protein 28 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0953 Dere-ChrDere07 13088982 13089734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0953 10 249 Receptor kinase-like Gene Family AT5G38280 34.694 1.53e-40 145