Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0934 ATGGTTCCCCAAGAATTCCGAAAAGGACCATGGACCGAACAGGAGGACATCAAATTGGTGTCCTTCGTTGGCTTGTTTGGTGATCGGAGATGGGACTTTATAGCCAAAGTTTCAGGTTTAAATAGAACTGGTAAGAGTTGCAGGTTACGGTGGATTAATTACCTTCATCCTGGTCTCAAAAGGGGGAAGATGACCCCCCAAGAAGAGCGCCTTGTCCAGGAGCTACACTCTAAATGGGGAAATAGATGGTCAAAAATAGCCCGCAAATTACCAGGGCGCACGGACAACGAGATTAAGAATTACTGGAGAACTCATATGAGGAAGAAGGCCCAGGAGAAAAAGCTAGCAGCCACTTCATCACCAACATCCTCCAGTTGTATTTCCTCGCTATCATCAAACAACCATACAGTGGATTCATATCCTTCCAAAGAGACTGGAGAAGAAAGCTTTTATGACACAGGGGGTCCTAATATGGTATCCTCGAAGGGGGAAGAGGAAGACCAAGCGTGTGAACAGGTCTACTCCATGGACGATATATGGAAAGATATTTCTCTGTTGGAAGACAACATTCTGCAGCCAGTCATTAATGGGTACAGTGAAGAGGGCTGCAACTTCTCTTGTCCTTCGATGCCTTCTCCATCATGGGCGTACTCTTCAGACTCGCTATGGGTTATGGATGAAGAGGAAATTAAGAGTTTTCTCCCTATAAGTGACCAAGTCCTTCCCTGTCACGAACAAGGGAGAGCATTTTTAACTAGCTATTAG 765 0.4536 MVPQEFRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWINYLHPGLKRGKMTPQEERLVQELHSKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKLAATSSPTSSSCISSLSSNNHTVDSYPSKETGEESFYDTGGPNMVSSKGEEEDQACEQVYSMDDIWKDISLLEDNILQPVINGYSEEGCNFSCPSMPSPSWAYSSDSLWVMDEEEIKSFLPISDQVLPCHEQGRAFLTSY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0934 254 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Dere07g0934 254 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Dere07g0934 254 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Dere07g0934 254 Gene3D - 64 107 - -
Dere07g0934 254 MobiDBLite consensus disorder prediction 115 140 - -
Dere07g0934 254 FunFam MYB transcription factor 63 129 - -
Dere07g0934 254 Gene3D - 8 60 - -
Dere07g0934 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Dere07g0934 254 CDD SANT 63 106 IPR001005 -
Dere07g0934 254 CDD SANT 10 55 IPR001005 -
Dere07g0934 254 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 135 IPR044676 GO:0003700|GO:0006355|GO:0043565
Dere07g0934 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Dere07g0934 254 SMART sant 7 57 IPR001005 -
Dere07g0934 254 SMART sant 60 108 IPR001005 -
Dere07g0934 254 FunFam Myb transcription factor 8 60 - -
Dere07g0934 254 MobiDBLite consensus disorder prediction 112 153 - -
Dere07g0934 254 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Dere07g0934 254 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0934 Dere-ChrDere07 12954900 12955883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0934 1 251 MYB Transcription Factor Family AT5G59780 60.079 5.29e-92 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0934 Myb_DNA-binding 6.5e-15 CL0123