Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0904 ATGGAACTTCTTCAACTTCCCAAGCTTTGCTTTACTCTTTTCATCTTCCAAGCCTTCTTCTTCCACACATCAATCAAAGCTTCTCCCTCGAACTCGAACATATTCCGAGAATACATAGGAGCTGAGTTCAAGAACGTCAAATTCTCCGACGTCCCTATTAACCCAAACGTCGACGTTCACTTCATTCTCTCTTTCGCCATAGACTATGACACGTCATCCTCCCCTTCTCCCACCAATGGAAAGTTTAACATCTTCTGGGACACCCAAAACCTAAGCCCCCCCCAAGTTTCCTCCATCAAAGCTCAGAGTTCCAACGTCAAGGTTGCTCTCAGTCTTGGAGGAGACAGCATCAACGGAGGTGGCTATGCTTTCTTCGAACCCTCTTCAGTTAACTCATGGGTTTCCAACGCAGTTTCTTCACTCACAAAGATCATTCAAGAATACAACCTGGACGGAATCGACATCGACTATGAACACTTCAAAACAGACCCTAACACGTTTGCTGAGTGCGTTGGACAACTGATCAAGACACTCAAGAACAATGGGGTCATCAAATTCGCTTCCATAGCTCCATTCGATGATGATGAAGTAGAGAGCCATTACTTGGCGTTGTGGAAGAGTTATGGACACCTGATAGATTATGTGAATTTTCAGTTTTATGCATACGATAAAGGAACTAGCGTGGCTCAGTTCATTGATTACTTCAACACGCAGAGCTCGAAATATAGTGGTGGGAAGGTGTTGGTGAGTTTTATAAGTGATGGGAGTGGAGGGTTGTCTCCTGAAGATGGGTTCTTCACTGCGTGCCATAAGCTACAAAGTCAGCAAAAGCTTCATGGTATCTTTATTTGGTCTGCAGATGACTCCAAGGCTAATGGTTTCCGTTATGAGAAGCAATCACAAGCCTTGTTGGCTATTCCACACTAG 927 0.4444 MELLQLPKLCFTLFIFQAFFFHTSIKASPSNSNIFREYIGAEFKNVKFSDVPINPNVDVHFILSFAIDYDTSSSPSPTNGKFNIFWDTQNLSPPQVSSIKAQSSNVKVALSLGGDSINGGGYAFFEPSSVNSWVSNAVSSLTKIIQEYNLDGIDIDYEHFKTDPNTFAECVGQLIKTLKNNGVIKFASIAPFDDDEVESHYLALWKSYGHLIDYVNFQFYAYDKGTSVAQFIDYFNTQSSKYSGGKVLVSFISDGSGGLSPEDGFFTACHKLQSQQKLHGIFIWSADDSKANGFRYEKQSQALLAIPH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0904 308 Pfam Glycosyl hydrolases family 18 60 224 IPR001223 GO:0005975
Dere07g0904 308 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 150 158 IPR001579 GO:0004553|GO:0005975
Dere07g0904 308 PRINTS 2-S globulin family signature 267 286 IPR000677 -
Dere07g0904 308 PRINTS 2-S globulin family signature 135 157 IPR000677 -
Dere07g0904 308 PRINTS 2-S globulin family signature 32 45 IPR000677 -
Dere07g0904 308 PRINTS 2-S globulin family signature 79 94 IPR000677 -
Dere07g0904 308 PRINTS 2-S globulin family signature 96 114 IPR000677 -
Dere07g0904 308 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 33 308 IPR001223 GO:0005975
Dere07g0904 308 CDD GH18_narbonin 34 289 - -
Dere07g0904 308 SUPERFAMILY (Trans)glycosidases 31 299 IPR017853 -
Dere07g0904 308 PANTHER CHITINASE 2-LIKE 20 305 - -
Dere07g0904 308 Gene3D Glycosidases 31 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0904 Dere-ChrDere07 12603521 12604447 Dispersed/Proximal