Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0898 ATGGTTCTGAGAGTCAGAGAGAATTATATGGGTTGCTTTTTCTGCACCCGCGAATCAAACAAAAAATCCCCCAGTAAAAACGATTGCAAAAGCCTTGAACACAGCAAGAAGAAGCCCAACAATCGCACTATTGCAGATAAGGGGAAAGCAGATTCGAATGTGAACGTGAAGAAGGAATTAGGTGCATCTTGCAAGGACGATCAAGTTTGTCTGGAAGAGAAGGCTTTGAATTTAGAAAAGGAAATTTCGAAGAACGCAAAAGCTAACGATCAACATCGTGCACAATCATTCACATTCGATGAGCTCGCAGCTGCCACGCATAATTTTAGGTCAGATTGCTTCCTAGGCGAAGGAGGTTTTGGCAAGGTCTACAAGGGACGCTTAAAGAGATTGAATCAGGACGTGGCTATAAAGCAACTGGACCCAAATGGGCATCAAGGGAAAAGGGAATTTGTAGTGGAAGTATTGACACTAAGTACGGCAGACCACCCTAATCTTGTGAAATTGATTGGGTTTTGTGCCCAGGGACATCAACGCCTGCTGGTCTATGAATACATGGCCTTAGGATCCCTCGAGAATCTTTTGTATGATCTTCCAGCTGGTAGAAAAGGTCTGGATTGGAACACAAGAATGAAGATAGCAGCAGGAGCAGCAAGGGGCTTAGAGTACTTACACGACAAGATGACGCCTCCAGTGATATACAGAGACCTGAAATGTTCCAACATATTACTAGGAGAGGGATATCATCCCAAGTTGTCTGACTTTGGGTTGGCAAAAGTAGGGCCAAGTGGCGATAACACCCACGTCTCCACTAGGGTTATGGGCACCTATGGCTACTGTGCTCCAGATTATGCCATGACTGGTCAATTGACCTTTAAGTCTGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTTATCACTGGCAGAAAAGCCTTCGACAAGTCAAAACCTACCAACGAACAAAATTTGGTCTCATGGGCAAGGCCGAGGTTTAAAGACAGGAAAAGATTCACAAAAATGGTTGATCCATTGCTTGAAGGACAATATCCAGTGCGAGGTTTGTACCAAGCTCTTGCTATTGCTGCAATGTGTGTGCAAGAGAAGCCCACTATGAGACCTGTTATAGGCGATGTCGTTACAGCTCTAAATTATCTTGCATCCCATAAATATGATCCCCAAAATCAAACACCGCAGAATTTGAGACCCAGAAGAGTCCCCAGACTCAGAAACGATAGTAATGGTCATCCATGTATTGCTAATACTTCTGAGACAGACAGATCATCTGAGGATGAACTTACTAATACTTCTGAGACAGACAGATCATTTGGAAACGAAGTTACTAATAATTCTGAGACTGATAGATCTGGGGACGATGTTGCTAATAATTCTGAGACAGACAGATCTGGGGATGAAGAAAATTAA 1425 0.433 MVLRVRENYMGCFFCTRESNKKSPSKNDCKSLEHSKKKPNNRTIADKGKADSNVNVKKELGASCKDDQVCLEEKALNLEKEISKNAKANDQHRAQSFTFDELAAATHNFRSDCFLGEGGFGKVYKGRLKRLNQDVAIKQLDPNGHQGKREFVVEVLTLSTADHPNLVKLIGFCAQGHQRLLVYEYMALGSLENLLYDLPAGRKGLDWNTRMKIAAGAARGLEYLHDKMTPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAFDKSKPTNEQNLVSWARPRFKDRKRFTKMVDPLLEGQYPVRGLYQALAIAAMCVQEKPTMRPVIGDVVTALNYLASHKYDPQNQTPQNLRPRRVPRLRNDSNGHPCIANTSETDRSSEDELTNTSETDRSFGNEVTNNSETDRSGDDVANNSETDRSGDEEN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0898 474 MobiDBLite consensus disorder prediction 19 49 - -
Dere07g0898 474 SUPERFAMILY Protein kinase-like (PK-like) 94 394 IPR011009 -
Dere07g0898 474 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Dere07g0898 474 Coils Coil 71 91 - -
Dere07g0898 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Dere07g0898 474 ProSiteProfiles Protein kinase domain profile. 109 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0898 474 MobiDBLite consensus disorder prediction 21 45 - -
Dere07g0898 474 PIRSF TyrPK_CSF1-R 13 111 - -
Dere07g0898 474 PIRSF TyrPK_CSF1-R 197 456 - -
Dere07g0898 474 PIRSF TyrPK_CSF1-R 107 198 - -
Dere07g0898 474 MobiDBLite consensus disorder prediction 391 474 - -
Dere07g0898 474 FunFam Serine/threonine-protein kinase PBS1 186 401 - -
Dere07g0898 474 FunFam probable serine/threonine-protein kinase RLCKVII 80 185 - -
Dere07g0898 474 CDD STKc_IRAK 115 384 - -
Dere07g0898 474 Gene3D Phosphorylase Kinase; domain 1 78 185 - -
Dere07g0898 474 MobiDBLite consensus disorder prediction 458 474 - -
Dere07g0898 474 Pfam Protein kinase domain 114 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0898 474 MobiDBLite consensus disorder prediction 438 457 - -
Dere07g0898 474 PANTHER OS07G0668900 PROTEIN 12 396 - -
Dere07g0898 474 Gene3D Transferase(Phosphotransferase) domain 1 186 405 - -
Dere07g0898 474 SMART serkin_6 109 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0898 Dere-ChrDere07 12518490 12522271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0898 80 388 Glycoside Hydrolase AT3G07070 60.759 9.20e-140 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere07g0898 Pkinase 4.1e-44 CL0016