Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0888 ATGCTTCGTTTGGCATGGCACTCTGCTGGGACCTTTGACGTGAAGACGAAGACCGGTGGTCCCTTCGGAACCATGAAGCTTGAACAGGAATGTAAACACGGCGCTAACAATGGACTTGATATAGCTGTTAACCTGTTGGAGGACATAAAGAAGGAGTTCCCCAATTTGACTTACGCTGATTTCTACCAGTTGGCTGGGGTTGTTGCCGTTGAGGTCACTGGTGGGCCTAAAATTCCGTTCCACCCTGGCAGAGAGGACAAGCAAGAAGTGCCTCCGGAGGGCCGCTTGCCCGATGCAACAAAGGGTTGTGACCATTTGAGGCAAGTATTCGCGACTCAAATGGGGCTTAGCGATCAGGATATTGTTGCTCTCTCTGGTGGTCACACCCTTGGAAGGTGCCACAAGGAGCGTTCAGGATTTGAGGGTGCATGGACCAAGAATCCTCTCGTTTTTGACAACTCATACTTCACGGAACTCTTGAAGGGTGAAACTGATGGCCTCCTGCAACTGCCAACTGATAAGGCACTTCTGGATGACCCTGTATTCCGCCCTCTTGTTGAGAAATATGCTAATGATCAAGATGCTTTCTTTGCTGATTACACTGAGGCTCATCTGAAGCTCTCCGAACTTGGGTTTGCTGAAGCCTAA 648 0.4969 MLRLAWHSAGTFDVKTKTGGPFGTMKLEQECKHGANNGLDIAVNLLEDIKKEFPNLTYADFYQLAGVVAVEVTGGPKIPFHPGREDKQEVPPEGRLPDATKGCDHLRQVFATQMGLSDQDIVALSGGHTLGRCHKERSGFEGAWTKNPLVFDNSYFTELLKGETDGLLQLPTDKALLDDPVFRPLVEKYANDQDAFFADYTEAHLKLSELGFAEA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 162 187 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 16 26 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 30 54 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 114 135 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 74 86 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 55 73 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 136 160 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Plant ascorbate peroxidase signature 95 112 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 Gene3D - 1 211 - -
Dere07g0888 215 Gene3D Peroxidase, domain 2 97 204 - -
Dere07g0888 215 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 211 IPR044831 GO:0004601|GO:0034599
Dere07g0888 215 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Dere07g0888 215 SUPERFAMILY Heme-dependent peroxidases 1 211 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 FunFam Cytosolic ascorbate peroxidase 1 101 - -
Dere07g0888 215 ProSiteProfiles Plant heme peroxidase family profile. 39 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 CDD ascorbate_peroxidase 1 215 - -
Dere07g0888 215 Pfam Peroxidase 1 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Haem peroxidase superfamily signature 144 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Haem peroxidase superfamily signature 74 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 PRINTS Haem peroxidase superfamily signature 120 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0888 215 FunFam L-ascorbate peroxidase, cytosolic 97 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0888 Dere-ChrDere07 12372089 12374238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0888 38 207 Peroxidase AT4G16270 31.280 1.77e-19 83.6