Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0882 ATGGAGCAGTTCATCGACAACTTGCCGTCGATGGATCTGATGCGGTCTGAGAAGATGACCTTCGTTCGACTCATCATGCCTGTTGAGTCCGCTCACCGAGCCATCTCATATTTGGGTGAACTTGGCCTCCTCCAATTCCGAGATTTAAATGATGACAAAAGCCCTTTCCAGAGAACCTTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTTAAGGATCAAATCAATAAAGCTGGTCTGATGTCTTCTGCTCGTCCTGTCTTGCAACCTGATATTGAGTTGGAGGAACTAGAGATACAGCTAGCTGAGCATGAACATGAACTAAATGAAATGAACTCTAACAGCGAGAAACTTCAGCAGTCATATAACGAGCTACTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGTGTCAAGTCATAACCATGCTGCTTTAGAGGAGAGAGAATTGGAGGAGAATGTATACTCAAATGATGATTATGTTGAGACTGCATCTCTGCTTGAACAGGACACAGGGCCTGGACCATCAAATCAATCTGGTTTAAGATTTATTAGTGGGATAATTTGTAAATCTAAAGTTCCAAGGTTTGAAAGGATGTTGTTTCGTGCTACGAGAGGCAATATGCTTTTCAACCAGGCATCAGCTGATGAACAAATCATGGATCCTATTTCAGCAGAGACGATTGAAAAAACGGTGTTTGTTGTGTTTTTCTCCGGGGAGCAGGCAAGAACAAAGATTTTGAAAATCTGTGAGGCATTTGGTGCTAATTGTTACCCTGTTCCTGAAGATATACATAAACAGAGGCAAATAACTAGAGAGGTTTCATTACGTCTTGTTGACTTAGAAGCAACTTTGGATGCTGGTATTAGGCACCGGAATAAGGCCCTTGCTTCCATAGGGGTTCATCTAGCAAAATGGATATATATGGTAAGAAGGGAGAAGGCTGTGTATGATACACTCAACATGCTTAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGATGGTGCCCCATATTTGCAAAAACGCAGATTCAGGAGGCACTGCATCGTGCAACTTTTGAGAGTAATTCTCAAGTTGGCATTATCTTTCATCCAATGGATGCTGTGGAATCACCACCTACTTATTTTAGAACCAACCGTTTCACAAGTGCATATCAGGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAAGCAAATCCCTCGGTTTACACAGCAATTACATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTGGGAGCATTAGTTCTTATAGCACGTGAAAGAAAGCTTAGCACACAGAAACTTGGAAGCATTATGGAGATGCTATTTGGAGGCCGCTATATACTTCTTTTGATGTCACTGTTTTCAATCTATTGTGGGCTAATCTACAATGAATTCTTCTCTGTTCCTTTCCACATTTTTGGTGCATCTGCTTATAAATGCCGAGATACTTCATGCAGAGATGCGCATGCTGCTGGCTTAGTCAAATACCGAGATCCGTACCCATTTGGTGTAGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCTATTCTTTTGGGCGTGGCACAGATGAACTTAGGAATCATATTAAGTTACTTCAATGCACGTTTCTTTGGCAACTCAGTGGATATAAGGTACCAGTTTGTCCCACAGGTGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGATCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTTTAAGCCCCACTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAGATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCAAACGGAGAGATATCAAGGACGTGCTTATGAGAGGCTTAATACATCTGAAATGGATCTCGAGGTGGAACCAGACTCTGCTAGGGCCAGGCAACATCACGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAGTTTGTCCTTGGTGCTGTTTCAAATACAGCATCATATCTTAGACTCTGGGCATTAAGCTTGGCTCACTCGGAACTTTCTACTGTTTTCTATGAGAAAGTCCTCCTTCTTGCTTGGGGGTATGACAATCTGGTCATTCGGTTAGTGGGCCTAGCTGTTTTTTCCTTTGCAACTGCCTTTATATTACTCATGATGGAGACCCTCGGTGCTTTCCTTCATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGGGATGGTTATAAGTTCAGACCTTTTTCCTTTGCCTTATTAGCGGATGATGATGATTGA 2466 0.4173 MEQFIDNLPSMDLMRSEKMTFVRLIMPVESAHRAISYLGELGLLQFRDLNDDKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSARPVLQPDIELEELEIQLAEHEHELNEMNSNSEKLQQSYNELLEFKIVLQKACGFLVSSHNHAALEERELEENVYSNDDYVETASLLEQDTGPGPSNQSGLRFISGIICKSKVPRFERMLFRATRGNMLFNQASADEQIMDPISAETIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDIHKQRQITREVSLRLVDLEATLDAGIRHRNKALASIGVHLAKWIYMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALHRATFESNSQVGIIFHPMDAVESPPTYFRTNRFTSAYQEIVDAYGVARYQEANPSVYTAITFPFLFAVMFGDWGHGICLLLGALVLIARERKLSTQKLGSIMEMLFGGRYILLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDTSCRDAHAAGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNARFFGNSVDIRYQFVPQVIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLQTERYQGRAYERLNTSEMDLEVEPDSARARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFSFATAFILLMMETLGAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALLADDDD 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0882 821 Pfam V-type ATPase 116kDa subunit family 37 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dere07g0882 821 PIRSF ATP6V0A1 9 821 IPR026028 GO:0000220|GO:0046961
Dere07g0882 821 Coils Coil 100 127 - -
Dere07g0882 821 PANTHER VACUOLAR PROTON ATPASES 13 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0882 Dere-ChrDere07 12334126 12343513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0882 1 816 Primary Pumps ATPases(2) AT2G28520 80.539 0.0 1363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1128 08 15173248 15188524 Dere07g0882 07 12334126 12343513 CCT