Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0864 ATGAGTGTGATAGATATTATCTTTCGAGTTGATTCGATATGCCAGAGATACGAGAAATATGACATTGATAAGCAGCGGGAGCTCAATGCATACGGTGATGATGCATTTGCTCGCCTCTACGCAGCCGTTGAAAATAGCATTCAAGCCGCTCTTAATAAATCGGAGACTGCTTCTCATGAGAAGAACAGGGCAACCGCTGCGGCGTTGAATGCAGAAGTTCGTCGGGCAAAGGGTCGTCTCATGGACGAAATCCCTAAGTTGCGTAAACTGGCGCAGAAGAAGGTTAAGGGTCTCACAAGTGAAGAAATGGCCATCCGGAATGATATTGTTCTGGCATTGCCAGAAAGGATCCAAGCAATTCCGGATGGTATTGCTGCTGCAGTTAATCAAGCCGGAGCAGGGTCTGCTCCCACATCTCATCAGCATATCAAGTTTGATTCATCAGAGGGATACAATGCCGATGAATATTACCAACAAACTGAAGAATCAAGTCAGTTTAGGCAAGAGTATGAAATGCGAAAAATGAAACAGGATGAAGGGCTTGATATTATATCAGACGGATTGGATACATTGAAAAATTTGGCCCTTGATATGAATGAGGAATTAGATCGGCAAGTTCCATTAATGGATGAAATTGGTACAAAGGTGGATAAGGCGACATCTGACATCAGAAATAATAACACTAGGCTGAAGAAAACTCTCAATGAGGTGAGGTCTAGTCGAAATTTTTGCATTGACATCATTCTGCTGTGTGTTCTCCTTGGCATTGTTTCCTATATATACAATGCACTGAGGAATTGA 801 0.4257 MSVIDIIFRVDSICQRYEKYDIDKQRELNAYGDDAFARLYAAVENSIQAALNKSETASHEKNRATAAALNAEVRRAKGRLMDEIPKLRKLAQKKVKGLTSEEMAIRNDIVLALPERIQAIPDGIAAAVNQAGAGSAPTSHQHIKFDSSEGYNADEYYQQTEESSQFRQEYEMRKMKQDEGLDIISDGLDTLKNLALDMNEELDRQVPLMDEIGTKVDKATSDIRNNNTRLKKTLNEVRSSRNFCIDIILLCVLLGIVSYIYNALRN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0864 266 CDD SNARE_Qc 176 232 - -
Dere07g0864 266 SUPERFAMILY SNARE fusion complex 164 232 - -
Dere07g0864 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Dere07g0864 266 SMART tSNARE_6 166 233 IPR000727 -
Dere07g0864 266 Pfam SNARE domain 208 258 IPR000727 -
Dere07g0864 266 PANTHER SYNTAXIN 43 252 IPR045242 -
Dere07g0864 266 FunFam Syntaxin 6 178 241 - -
Dere07g0864 266 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Dere07g0864 266 Gene3D - 171 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0864 Dere-ChrDere07 12114942 12117455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0864 1 265 SNARE and Associated Proteins AT3G09740 65.169 7.32e-130 367