Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0857 ATGAAGCAAGTCTTCTTCTTCTCACTCCTCCTCCTGTTTTCCACCACCATTATAGCCCAATCTCCTGCTCCATCTCCTAAGGGCCCACCAAAACCTGCCTCCGCCGCCACGGCGCCAGCTCCGGCCAAACCATTAGTACCCACATTACCCCAATCACCTTCTTCTGACGCTTCTGATTCTTCCAACGACGACATCATCAAAATTCTTAGAAAGGCCAAGTCTTTCAGTGTCCTGATCCGTCTTCTCAAAACAACCCAAATAATCAATCAAATCAATTCTCAGCTCATCACCACAAAATCTGGGGGATTAACCATTCTTGCTCCGGACGATGGTGCCTTTTCGCAGCTCAAGGTTGGGTTCCTGAATTCTCTGGACGACAATCAAAAGATCGAACTTTTACAGTTCCACGTGTTCCCCACTTACGTTTCGAGCTCGAACTTTGATTCTCTGACGAACCCTGTTCGGACACTGGCCGGAGACGACCCCGCGAGGTTGCAGCTGAACGTGACGGCTTATGGGAACAGTGTGAATATTTCGACGGGTGTGGTAAACGCCACGATCACGGGCATTGTGTACTCCGATAAGCAGCTTGCGATTTACCACGTGGACAAGGTACTTCTTCCTTTGGACTTCTTTCAGCCTAAGCCACCAGCTCCGGCGCCGGCTCTGGCGAAGGCGAAGGCGCCTAAAGCTGATAAGGATGAATCATCGGACGGCGATGAGGTTCAGACAACTAAGCACAATTCTGGGGCCATCAGTAATTCTGGTACTCGAGGAGCATTGTTGGTGTCCCTTGGAGTTGCGCTCGTTGTGGGGAGGTCATTGTCGGCAGAGACAGTCGCCAGCGAAGATAGAAAACAGAGAAGAAAGGGAAGGATGGACGAAAAGAGAGAAAAGAAGGAAGGAAGGGCGAAGAGAGAGAGAGGAAAGGCTAGAGAGAGGGAAGTGGAAGTCGAAGACCCCATCATTCATCGCCGGCGATTGGGTTCTAGGTTGATGAAGAGACCAAAACTAAATCAGAACAAGATGGACAAAGTGGATGACGCAATCGTCGAAGCAGCAACAGAGCAAGACTAA 1077 0.5014 MKQVFFFSLLLLFSTTIIAQSPAPSPKGPPKPASAATAPAPAKPLVPTLPQSPSSDASDSSNDDIIKILRKAKSFSVLIRLLKTTQIINQINSQLITTKSGGLTILAPDDGAFSQLKVGFLNSLDDNQKIELLQFHVFPTYVSSSNFDSLTNPVRTLAGDDPARLQLNVTAYGNSVNISTGVVNATITGIVYSDKQLAIYHVDKVLLPLDFFQPKPPAPAPALAKAKAPKADKDESSDGDEVQTTKHNSGAISNSGTRGALLVSLGVALVVGRSLSAETVASEDRKQRRKGRMDEKREKKEGRAKRERGKAREREVEVEDPIIHRRRLGSRLMKRPKLNQNKMDKVDDAIVEAATEQD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0857 358 MobiDBLite consensus disorder prediction 22 61 - -
Dere07g0857 358 FunFam Fasciclin-like arabinogalactan protein 11 48 208 - -
Dere07g0857 358 SUPERFAMILY FAS1 domain 68 209 IPR036378 -
Dere07g0857 358 Gene3D FAS1 domain 46 208 IPR036378 -
Dere07g0857 358 MobiDBLite consensus disorder prediction 279 318 - -
Dere07g0857 358 MobiDBLite consensus disorder prediction 23 48 - -
Dere07g0857 358 MobiDBLite consensus disorder prediction 227 242 - -
Dere07g0857 358 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 254 IPR045003 -
Dere07g0857 358 MobiDBLite consensus disorder prediction 218 255 - -
Dere07g0857 358 SMART fasc_3 104 209 IPR000782 -
Dere07g0857 358 MobiDBLite consensus disorder prediction 278 318 - -
Dere07g0857 358 ProSiteProfiles FAS1/BIgH3 domain profile. 62 206 IPR000782 -
Dere07g0857 358 Pfam Fasciclin domain 74 208 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0857 Dere-ChrDere07 12068685 12071581 Dispersed/Proximal