Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0851 ATGGCTTCTTCCAAAAATTCCAAGACAGAAACGAAAAGCAAGGTTGCAGAAAGCTCCAAAACAGCGAGTATAGCCACTAAGCCCAGGAAGGAGAAGCACTTAGACAAGAAAAAGAAGAGCAATAAGAAGAAAAAACTCAGCAATTGCGATGTGAAGGAAGATAAACCGATCGTTGTTCCATCGCCCAGCACTGAGTCCCATGGAAAAGGAGAAGAGGAGGGGCGTGAGGAAGACAAGACTGAGATCACAAATGGGCGAACCAGCGGAACGCAACCCAAGAGAGGTAAAGTCAAAGGAATGAAAGATGAAGATGAAGCTGAAGGGAAAGAAGACGCCAAAGGTAATGTATTTCCGATGAATCGTATCAGGACAATAATTAGGGGCCGAGATCTTGATTTGCGTATTTCCCAGGAAGCCATATTTGTCATCAACAAAGCCACGGAGAAGTTCCTTGAACAATTTACACGGGACGCTTATGCTACCTGTGCTCGGGATCGAAAGAAATCTCTTGCTTACAAACACCTATCATCTGTTGTAAGTAAGCAGAGCAGATACGACTTTCTTTCAGATTTTGTTCCCGAGAAACTAAAAGCTGAGGATGCACTAAGGGAGAGAAATTCCGGTGTGAATGTTGGTTAG 639 0.4397 MASSKNSKTETKSKVAESSKTASIATKPRKEKHLDKKKKSNKKKKLSNCDVKEDKPIVVPSPSTESHGKGEEEGREEDKTEITNGRTSGTQPKRGKVKGMKDEDEAEGKEDAKGNVFPMNRIRTIIRGRDLDLRISQEAIFVINKATEKFLEQFTRDAYATCARDRKKSLAYKHLSSVVSKQSRYDFLSDFVPEKLKAEDALRERNSGVNVG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0851 212 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 77 207 - -
Dere07g0851 212 MobiDBLite consensus disorder prediction 31 45 - -
Dere07g0851 212 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 117 179 IPR003958 -
Dere07g0851 212 SUPERFAMILY Histone-fold 85 188 IPR009072 GO:0046982
Dere07g0851 212 MobiDBLite consensus disorder prediction 1 112 - -
Dere07g0851 212 MobiDBLite consensus disorder prediction 66 83 - -
Dere07g0851 212 Gene3D Histone, subunit A 79 194 IPR009072 GO:0046982
Dere07g0851 212 MobiDBLite consensus disorder prediction 95 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0851 Dere-ChrDere07 12011151 12013381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0851 84 175 CCAAT-HAP5 Transcription Factor Family AT1G07980 45.652 9.26e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dere07g0851 CBFD_NFYB_HMF 2.2e-14 CL0012