Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0845 ATGGGGTGCTGTAATTGCTTTGGGTTCATCAAAAAATTCAAACGTCGCAGGAATAAGTGTGGCATCAAGAATAGTCCCTCTCAGGAGCCGTTGTTGTTGGATGAAGACAGAGATGACGATGGATCCTATGATGATGGTGGTACTGACACCACTAGCGGGGATGATAGTGAAGTGCCAATTCGTGCCAAACGTTCTGAGGAAATTTTGAAGTTGAGAGAAGAGAAAGATATGATTTGTAGGCAGTTTCCTGTTAAGGAAATTCACAAAGTTGTGCGCGCAGAGGATGAGAATGGTAACAAGATGGTAAATGAATATGTTCGTGAATATAAGATTGGTTCTGGTAGCTATGGAAAAGTGGCTCTATACCGGAGCTTTGTGGATGGAAAGCATTATGCAATCAAGGCCTTTCATAAGTCTCATTTACAGAAGCTTCGAGTTGCACCCTCAGAAACTGCCATGACTGATGTTTTGCGTGAGGTACTCATTATGAAAATGCTGGAACATCCTAATATAGTGAATCTTATTGAGGTGATTGATGACCCAGAATCAGATCAGTTCTACATGGTACTTGAATATGTAGAAGGCAAATGGGTTTGTGAAGGTTCAGGTCGTCCTTGTGCCCTGGGCGAAGAGACTGCTAGGAAATACTTGCGTGATATAGTTTCAGGATTAAGATATCTTCATGCTCATGATATAGTGCATGGAGATATCAAACCTGATAATCTGCTGGTTACTCGTCATGGTACAGTAAAGATTGGGGATTTCAGCGTCAGCCAAGCTTTTGAGGATGATAATGATGAGCTTCGCCGATCACCTGGCACTCCTGTTTTTACTGCTCCAGAATGTTGTTTAGGTCTTACCTATAATGGTAAAGCTGCAGACACATGGGCAGTGGGAGTTACTTTGTACTGTATGATTTTGGGCGAATACCCATTTCTTGGAGACACACTTCAAGATACTTATGACAAAATAGTCAATAATCCTATAATACTCCCACATGATTTGAACCCCTGGATAAGGGAATTACTAGAAGGGCTACTTTGCAAGGATCCAAAAGATCGGATGACATTGGGTGATGTTGCGCAGCATAGTTGGGTTATTGGTGATGATGGGCCAATTCCTGAGTATTTGTGTTGGTGCAAACGCAAGAGCTTGGAAGGGGAAGATTTAAATAGCAACAATATGCTTGCTTGA 1194 0.4196 MGCCNCFGFIKKFKRRRNKCGIKNSPSQEPLLLDEDRDDDGSYDDGGTDTTSGDDSEVPIRAKRSEEILKLREEKDMICRQFPVKEIHKVVRAEDENGNKMVNEYVREYKIGSGSYGKVALYRSFVDGKHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDQFYMVLEYVEGKWVCEGSGRPCALGEETARKYLRDIVSGLRYLHAHDIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYNGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPIILPHDLNPWIRELLEGLLCKDPKDRMTLGDVAQHSWVIGDDGPIPEYLCWCKRKSLEGEDLNSNNMLA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0845 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Dere07g0845 397 SUPERFAMILY Protein kinase-like (PK-like) 100 378 IPR011009 -
Dere07g0845 397 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 67 368 - -
Dere07g0845 397 FunFam Serine/threonine-protein kinase GRIK2 95 395 - -
Dere07g0845 397 CDD STKc_LKB1_CaMKK 111 366 - -
Dere07g0845 397 Pfam Protein kinase domain 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0845 397 FunFam Serine/threonine-protein kinase Ssp1 99 201 - -
Dere07g0845 397 MobiDBLite consensus disorder prediction 24 59 - -
Dere07g0845 397 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Dere07g0845 397 Gene3D Phosphorylase Kinase; domain 1 99 202 - -
Dere07g0845 397 SMART serkin_6 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0845 397 Gene3D Transferase(Phosphotransferase) domain 1 204 372 - -
Dere07g0845 397 ProSiteProfiles Protein kinase domain profile. 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0845 Dere-ChrDere07 11935844 11941060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0845 100 373 CBL-interacting serine-threonine protein kinases AT5G35410 32.482 1.59e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Dere07g0845 Pkinase 2e-57 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0845 07 11935844 11941060 Dere07g0845 07 11935844 11941060 ECH