Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0841 ATGCTAGTCCTATCTGCTTCTCTTGCTGTCAACCTTGATAAAATATTGACAATGATGTCATCTGGTAATTTGTTGATCATGTTCTTCTCCATTTGGTTGATCCTGCACAATTCTATATCGCTTCACCCCCTTCGCTACTTTCCCTTTGCCCACAAAGCTCAAAACATCGAAAGCAGCGATAATTCCCAACGGACGACCAATATGGGAAATACTGCCAGCAACAGCGGCAGCCGCCGTCGTAGTCGCCGGCGTCACCACGCCCCTCTTCTCCCTCCGCGGTCGCAAACAACTGCAAACGACGACGTTTACGCCGATTCCGCCTCCCGCTCTTCTCAGTATGCAAACACCGCTACGCCTGGCGGAGTCCGTCCGTCCCCGCTGACGGGAAATTTGGGTGACGGGCAGCATCCGTGTGGGCCCGTTTGCCCAATGATTACACCTTTTGTTGAGCATCAGAAAGCAGTGACCATTCGGAATAGTGTGAATATCAAGAAGGAGACGCTGCGGCTTGAGCCTGATCAGGAGAACCCCGGGAGCTTCCTTGTGGCTTTCACCTTCGATGCCACTACACCTGGAAGCATTACAGTAATGTTTTATGCGGAGGAGACTGTAGATGGTAAGCTGGTAGCAGTAAAGGAAACCGTGCTTAAACAAATGTCAATGCCTTTTGAGCAAGGTCTGTGTCAGAAGTTTAGTCAACCTTCCGGAACTGGAATTGACTTCTCAAAGTTAGAGGAGACAGGACTGACAAAAGGTGATACTGAAGTTTATCCTCTGGTGCTGAAGGCTGAGGCTCTGCCATTAAACCCTCATGAAACTGATGGAAATCCATCTTTTCAAATTACTCTGGCAAGTTTCGAGAAGAGAGAGAATGGCGATTATAAGGTCCGAGTAATGAAACAGATTCTCTGGGTTAATGGGAACAGGTATGAGCTGCAAGAGATATATGGCATTGGGAATGCAGGTGATGCTGATTTTAACGACCTTGAGTCTGGAAGAGAATGTGTAATTTGCTTATCAGAACCACGAGACATAACGGTTCTCCCTTGCCGACACATGTGCATGTGTAGTGGCTGTGCCAAGCTTTTGAAGTCCCATAACTGCCCCATATGTCGGCATCCGGTTGAGCGGCTTCTGGAAATTATGGTGGATAATGGTTCTGGTAAACTTTGGTCAGAATTTGTACCCGTATCTTTCCTTGGCTTTGGTGATGAAACTATTGTTTATAATTATTACGCATTAGCTCATTATGCTCTTGACTACGGCAGTTTGCTGGCTACCGTGTTCTGTTTAGACAGAAAATTTGAAGTTGCATCCACTATCTTTCTTCATTATGATGATAAACATGAAGCCTGGACCTGTAACCGCATGAGTAAACCCAGATTCATTCTGGAGGGGAGTATAAACCTCAGTGCTTTATTTGTTTTACATGAAAGAGTAATCTCAGGTGCAAATTCAGATGACAGGTATTCAAGTTATGGCCATGTCTCGTGGGGTGTGGCTTCGTGGGCGGTTATAGGAGACGAGAACAGAGGAAGATTGGGCGTTGGCTATCGCATTTCGAAGTAG 1569 0.4646 MLVLSASLAVNLDKILTMMSSGNLLIMFFSIWLILHNSISLHPLRYFPFAHKAQNIESSDNSQRTTNMGNTASNSGSRRRSRRRHHAPLLPPRSQTTANDDVYADSASRSSQYANTATPGGVRPSPLTGNLGDGQHPCGPVCPMITPFVEHQKAVTIRNSVNIKKETLRLEPDQENPGSFLVAFTFDATTPGSITVMFYAEETVDGKLVAVKETVLKQMSMPFEQGLCQKFSQPSGTGIDFSKLEETGLTKGDTEVYPLVLKAEALPLNPHETDGNPSFQITLASFEKRENGDYKVRVMKQILWVNGNRYELQEIYGIGNAGDADFNDLESGRECVICLSEPRDITVLPCRHMCMCSGCAKLLKSHNCPICRHPVERLLEIMVDNGSGKLWSEFVPVSFLGFGDETIVYNYYALAHYALDYGSLLATVFCLDRKFEVASTIFLHYDDKHEAWTCNRMSKPRFILEGSINLSALFVLHERVISGANSDDRYSSYGHVSWGVASWAVIGDENRGRLGVGYRISK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0841 522 MobiDBLite consensus disorder prediction 58 76 - -
Dere07g0841 522 Pfam Zinc finger, C3HC4 type (RING finger) 333 377 - -
Dere07g0841 522 CDD mRING-HC-C3HC5_MGRN1-like 333 372 IPR045195 -
Dere07g0841 522 MobiDBLite consensus disorder prediction 58 134 - -
Dere07g0841 522 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 389 IPR013083 -
Dere07g0841 522 FunFam probable E3 ubiquitin-protein ligase LOG2 319 382 - -
Dere07g0841 522 MobiDBLite consensus disorder prediction 92 123 - -
Dere07g0841 522 ProSiteProfiles Zinc finger RING-type profile. 335 372 IPR001841 -
Dere07g0841 522 PANTHER MAHOGUNIN 87 382 IPR045194 GO:0061630
Dere07g0841 522 SMART ring_2 335 371 IPR001841 -
Dere07g0841 522 SUPERFAMILY RING/U-box 334 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0841 Dere-ChrDere07 11902643 11912366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0841 146 354 C3H Transcription Factor Family AT3G09770 59.817 7.61e-81 254