Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0834 ATGTTAAGCGTAGGCGAGGGAGTTGCAGAGGAAGTACGTGTCTTTTCTGAGCATTATGGCAAAAAGGCATGTGATCCTCTGAAACTACAGACATGGCGTCTCCTGTGTAAGCAAGCAGAAAACGAAAAAGCTGGGGTTGAAGACATTGAAAGGAAACTAGCTAGCAATTCACCTGTCCATTTCAATAAAGACAGCCTCTTAAAAGCGATTTTGCAGCTTTTCCTTTCTCCTTTTCTTAGCTGGAGTTTCTCAGGAAAGTCCTTGGTTTGTTGGCAACAGTTACCACTGCTTATAGTGATCCAACTTCTATCCCCTAACAAATCCAGCCACAAATTATATGCTGAAGCATTGTTCACTTTCAAGAGTAAGCTTGGCATTCCACAGCAACTCTTATGTAGCATTGAGAAATATCCATGTCATAGGCAAAGGGCCTGTCTTCACTGCCATGAACTAAAAGACCCAGGTGCTTCTCCTCTGTATAAGGAGATAGCAGCAAAGATAGATGGGACTAATGACGTTCCAACGCTTACACCTTTGCAAGATGCTCAAGTTAAAAGACCCAGAGGAACAAAGGCAGCTGCCATTGTTGGGGGTGTTGTAGCTGCCTTAGTTGTGATTGTCATTGTAGTGATTGTGTATGTCTGTTTGATGCGTCTTAAGAGATTAATAAGGCAAACATCTGAGACTGCTTCTTCTATTCCATCTCCAACTGTTGAAATGGGAATAGGCAACACCTCGCAGAACATAAGGCGGTTCACAATTTTGGAGCTAGAGCAAGCTACAAGAAATTTCAGTGAAAGTAATCTTGTAGGTGAAGGTAGATTTGGCTTGGTTTACAAGGGTTTACTTCACGATGGATCTATTGTTGCTATAAAAAGGCGCCAATATGCCTTGACTCAGAGTTTCATCCCTCAGGTGAAGCAAATAGCTGACATCCACCACATTCATCTTGTCAAGCTTATTGGTTATTATGAAGATAGCTATCAACAGTTACTTGTGTATGAATATCTCCCTAATGGAAATGTAGGGAATCATCTATATGACAATGAAGGCTTGCCCATTGGAAGGTTAGATATGCAGCGAAGATTATCTATAGCTCTGGGGGCTTCGAAAGGACTGGAGCATCTTCATTGTTTGGTTCCTCCTTTGGTGCACACAAATTTCAGAACAAGAAATGTTCTTGTGGATGACAGCTTCACAGCCAAGGTTTCTGATTATGGATTCTGCAAATTGCAAACTAATTCTGGCCACGCTGGCTCATCCTCAAACATGGACTGCTTTCTTGACCCAGAGTTGAATGTGTCACAGGATTTTTCAGAGAAGAGTGATGTATACAGTTATGGGGTCTTCTTACTTGAGTTGATTAGTGGACGAGAAGCACATTACAGAAACCTGTCAAACCCACAGGAGAATCTGATATTTCAGGGTAAGACCAACAATAACGTCTCGAACGAACTTGTGGACATGACACTAGGAGGCCATGAAAGGCAAGTAGCAAGAAAGGTAATGCGGTTGGCGATGATGTGTTTAGGTGGGAGTTATACAAGACCGTCCATGGGACAAATTGTACGAGAGCTGGAGCGGATCCAAAGAGAACTTGGTGCTTTACATTCTTACAACAGTGAGGAGATTGGTGGGGTCACTCTTGGGATCTCTGTGAAGTTGTACCGCTGA 1674 0.4271 MLSVGEGVAEEVRVFSEHYGKKACDPLKLQTWRLLCKQAENEKAGVEDIERKLASNSPVHFNKDSLLKAILQLFLSPFLSWSFSGKSLVCWQQLPLLIVIQLLSPNKSSHKLYAEALFTFKSKLGIPQQLLCSIEKYPCHRQRACLHCHELKDPGASPLYKEIAAKIDGTNDVPTLTPLQDAQVKRPRGTKAAAIVGGVVAALVVIVIVVIVYVCLMRLKRLIRQTSETASSIPSPTVEMGIGNTSQNIRRFTILELEQATRNFSESNLVGEGRFGLVYKGLLHDGSIVAIKRRQYALTQSFIPQVKQIADIHHIHLVKLIGYYEDSYQQLLVYEYLPNGNVGNHLYDNEGLPIGRLDMQRRLSIALGASKGLEHLHCLVPPLVHTNFRTRNVLVDDSFTAKVSDYGFCKLQTNSGHAGSSSNMDCFLDPELNVSQDFSEKSDVYSYGVFLLELISGREAHYRNLSNPQENLIFQGKTNNNVSNELVDMTLGGHERQVARKVMRLAMMCLGGSYTRPSMGQIVRELERIQRELGALHSYNSEEIGGVTLGISVKLYR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0834 557 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 201 529 IPR047117 -
Dere07g0834 557 Gene3D Transferase(Phosphotransferase) domain 1 337 545 - -
Dere07g0834 557 FunFam receptor-like serine/threonine-protein kinase NCRK 239 336 - -
Dere07g0834 557 ProSiteProfiles Protein kinase domain profile. 264 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0834 557 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Dere07g0834 557 SUPERFAMILY Protein kinase-like (PK-like) 246 532 IPR011009 -
Dere07g0834 557 Pfam Protein tyrosine and serine/threonine kinase 268 526 IPR001245 GO:0004672|GO:0006468
Dere07g0834 557 Gene3D Phosphorylase Kinase; domain 1 238 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0834 Dere-ChrDere07 11852349 11857222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0834 192 529 Receptor kinase-like Gene Family AT1G79620 33.705 9.14e-50 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Dere07g0834 PK_Tyr_Ser-Thr 2.2e-33 CL0016