Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0833 ATGGAGGTGGTGGAGCAGGGGGAGTTCTCAGCGAAAGACTACCAGGACCCGCCGCCGACGCCGCTGATCGACGCGGAGGAGCTGACGAAGTGGTCGTTCTACAGGGCGGTGATAGCGGAGTTCATAGCGACGCTTCTTTTCCTGTACATAACGGTGTTGACCATAATCGGGTACAGCAGTCAGACGGACACTAGCAAGGGTGGCACCGAGTGTGACGGCGTTGGCATTTTGGGCATCGCTTGGGCCTTCGGTGGCATGATCTTCATCCTCGTTTACTGCACCGCCGGCATCTCTGGAGGACACATAAACCCGGCGGTGACATTCGGGCTGTTCTTGGGAAGGAAGGTGTCGCTAATAAGGGCGTTGCTGTACATGGTAGCACAGTGCGCCGGTGCAATATGCGGTGCCGGACTAGCAAAGGGCTTCCAAAAAGCATACTTCGACCGGTACGGCGGTGGCGCCAACTTCGTCCACAGCGGCTACAACAAAGGCACCGCCTTAGGCGCCGAGATCATCGGTACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGATCCTAAGAGAAACGCCCGCGACTCCCATGTTCCGGTGTTGGCACCGCTACCTATTGGATTTGCGGTGTTCATGGTTCACTTGGCTACAATTCCGGTCACCGGTACCGGCATCAACCCTGCCAGAAGTTTCGGAGCTGCTGTCATCTACAACGATGATAGTATCTGGGATGATCATTGGATTTTCTGGGTTGGACCATTTATCGGAGCTGCGGTGGCTGCGTTCTACCACCAGTACATTCTCAGAGCTGCGGCCATTAAGGCTCTTGGATCCTTCAGGAGCAACAATTAA 846 0.5579 MEVVEQGEFSAKDYQDPPPTPLIDAEELTKWSFYRAVIAEFIATLLFLYITVLTIIGYSSQTDTSKGGTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCAGAICGAGLAKGFQKAYFDRYGGGANFVHSGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNDDSIWDDHWIFWVGPFIGAAVAAFYHQYILRAAAIKALGSFRSNN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0833 281 Gene3D Glycerol uptake facilitator protein. 20 281 IPR023271 -
Dere07g0833 281 CDD MIP 35 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 SUPERFAMILY Aquaporin-like 27 267 IPR023271 -
Dere07g0833 281 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Dere07g0833 281 FunFam Probable aquaporin PIP1-2 20 281 - -
Dere07g0833 281 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 270 IPR034294 -
Dere07g0833 281 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 NCBIfam MIP family channel protein 39 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere07g0833 281 Pfam Major intrinsic protein 27 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0833 Dere-ChrDere07 11842130 11844407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0833 9 279 Major Intrinsic Protein MIP AT2G37170 82.657 1.02e-170 473