Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0817 ATGTTATTGTGGGACTTCGGTCACGGTGAGACAAGAGCCAGTCCACCTTCTCTATCGTCTCTTCCGTTAGCTTCTTCCGACCAAAAAAATCGTGGGCCCTCACTTCTCCAACCATCACTCTACTCCCACGCCCTCTCACGGCGCGTGCAGTACACCTACAAGTCTCCGGCGAATTCACCAAAAGCGGGCTACGTGGGAAAGGGAGATTCTATTGTAGTTTTAGTTGTCGCTGCCTGGAATCGGGTTATGAAAACTCAGATTCTGAAAGTTCCCTGTGAATGGTGTGTGCATGGGAAGAACGTTTCTGAAACACCTCGGCACATTTTCGTCGTCTTGTATTTAAGAAAGTCTCTTTCGCAAGCAACAATGAAGGAAGAAGCTGAGAAGAGCTTGGATCCACAACTATGGCACGCGTGCGCGGGAGGTATGGTTCAGATGCCATCTCTGAACTCCAAAGTCTTCTACTTTCCTCAAGGACACGCCGAGCACGCCCAGGCCAACGTCGATTTCGCGACCTCCTTGAGGATTCCACCACTCATTCTCTGCCGCGTGGCAGCCGTGAAATTCCTCGCAGACTCAGATACCGACGAGGTTTTCGCCAAGATCAAGTTGATTCCTTTGAGAAACTCCGAGATAGATGAGGACGACGACGGCGGCGACGGAAATACTCACGGGTCAGAGAATTCAGATAAGCCCGCGTCTTTCGCTAAGACCTTAACCCAATCCGATGCTAACAATGGTGGAGGCTTCTCTGTTCCGAGATACTGCGCAGAAACCATATTCCCGCGGCTTGATTACTCGGCCGAGCCGCCGGTTCAGACCGTGATTGCGAAGGACGTTCACGGTGAAATTTGGAAGTTCAGGCATATATACAGAGGGACACCTCGTCGTCACCTGTTGACAACAGGGTGGAGTACTTTCGTGAACCAGAAGAAACTCGTGGCAGGGGACTCTGTGGTGTTTCTGAGGGCCGAAAATGGGGATCTCTGCGTTGGGATTCGCCGTGCGAAGCGGGGGATCGGCGGTGGATCAGAGGGCTTATCCGGGTGGAGCTCTGGTCCTGGGAACTGTGTGGGGCCTTATGGGGCTTTCAGTGCGTTGTTAAGAGAGGAGAACAAGCTTTTGCGAAATAATTTAAATGGTGGGAATTCGAATCCTGGGAGTAATCTGAGTGGGAGAGGAAGAGTGAGGCCTGAATCTGTGATGGAAGCTGTGACACTTGCTGCGAGTGGTCACGCATTTGAGGTTGTTTATTACCCACGAGCAAGTACTCCCGAGTTCTGTGTGAAGGCTGCGAGTGTTAAGGTAGCCATGAGAATTCAATGGTGTTCTGGGATGAGGTTCAAGATGGCCTTTGAGACTGAGGATTCTTCCAGGATAAGCTGGTTCATGGGCACTATTGCTTCTGTCCACGTTGTTGATCCTATTCGCTGGCCCAATTCTCCGTGGAGACTTCTTCAGGTTACTTGGGATGAGCCTGATTTGCTACAGAATGTGAAGCGAGTAAGCCCGTGGTTGGTTGAATTGGTATCAAACAGGCCGGTCATCCATCTCACGCCCTTCTCTCCTCCGCGGAAGAAGCTCCGGCTTCCTCAACACTTGGACTTCCCCCTTGATGGTCATTTTACAATACCGTCCTTTCCCAGCAGCAACCCCGTCGGACCCAGCAGCCCCTTGTGTTGTCTATCCGATAATGCTCCTGTAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTATCTCTTTCAGATCTCCACCTTAACAATAAACTGCAGATGGGGCTTCTTTCTAATAACATCCAGCAGCTTGATGTGCATCCCGGGATTTCTAATGGCAATATAATGATGAGCCATGACAAGAAAAATGACAGCTTGTCATGCTTGCTTACCATGGGAAATTCTAACAAGAGTTTGGAGAAATCTGATAATGTGAAGAGACACCAGTTTCTGCTTTTTGGACAGCCGATCCTGACTGAGCAACAAATTTCTCGAAGCTGTCCAAGTGATGTGCTGTCTCAGAATTTTTTGGGTAAAAATTCACCAGATGACAATAAGGATAAAGCCAAGTGTTTCTTTGGTGAATCCCACTCTGCGCTTTCACAACCAATTTCACCAGGACTATCTTCTACAGCCGAATTCTCTTGGCAACTTGGCTTGGATACTGGTCATTGCAAAGTTTTCATGGAGTCAGAAGATGTGGGACGGACCCTGGACCTATCCCGTCTCGGCTCTTACGAAGCACTGCATAGGAGACTAGCCAACATGTTTGGGCTTGAAAGATCTGAGATGTTGAGCCATGTGCTCTACCGCGATGCTACCGGTGCTGTCAAACAAACTGGAGAAGAACCATTCAGTGACTTCATGAAAACGGCAAAAAGATTGACAATTCTCACAGATTCAGGCAGCAAAGATATAAGGAGGGCGTGGATGACAGGATCCCGAAATGGAGAACATGGACTGGATGCATCAAACAAGACAGGTTGTCTGAGCATATTTGCCTAA 2502 0.492 MLLWDFGHGETRASPPSLSSLPLASSDQKNRGPSLLQPSLYSHALSRRVQYTYKSPANSPKAGYVGKGDSIVVLVVAAWNRVMKTQILKVPCEWCVHGKNVSETPRHIFVVLYLRKSLSQATMKEEAEKSLDPQLWHACAGGMVQMPSLNSKVFYFPQGHAEHAQANVDFATSLRIPPLILCRVAAVKFLADSDTDEVFAKIKLIPLRNSEIDEDDDGGDGNTHGSENSDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKRGIGGGSEGLSGWSSGPGNCVGPYGAFSALLREENKLLRNNLNGGNSNPGSNLSGRGRVRPESVMEAVTLAASGHAFEVVYYPRASTPEFCVKAASVKVAMRIQWCSGMRFKMAFETEDSSRISWFMGTIASVHVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNRPVIHLTPFSPPRKKLRLPQHLDFPLDGHFTIPSFPSSNPVGPSSPLCCLSDNAPVGIQGARHAQFGLSLSDLHLNNKLQMGLLSNNIQQLDVHPGISNGNIMMSHDKKNDSLSCLLTMGNSNKSLEKSDNVKRHQFLLFGQPILTEQQISRSCPSDVLSQNFLGKNSPDDNKDKAKCFFGESHSALSQPISPGLSSTAEFSWQLGLDTGHCKVFMESEDVGRTLDLSRLGSYEALHRRLANMFGLERSEMLSHVLYRDATGAVKQTGEEPFSDFMKTAKRLTILTDSGSKDIRRAWMTGSRNGEHGLDASNKTGCLSIFA 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0817 833 CDD B3_DNA 234 335 IPR003340 GO:0003677
Dere07g0817 833 Gene3D - 720 805 - -
Dere07g0817 833 MobiDBLite consensus disorder prediction 11 36 - -
Dere07g0817 833 FunFam Auxin response factor 233 337 - -
Dere07g0817 833 Gene3D - 233 337 IPR015300 -
Dere07g0817 833 MobiDBLite consensus disorder prediction 211 233 - -
Dere07g0817 833 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 129 800 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dere07g0817 833 ProSiteProfiles PB1 domain profile. 721 801 IPR000270 GO:0005515
Dere07g0817 833 Pfam B3 DNA binding domain 235 336 IPR003340 GO:0003677
Dere07g0817 833 MobiDBLite consensus disorder prediction 13 36 - -
Dere07g0817 833 SUPERFAMILY DNA-binding pseudobarrel domain 228 341 IPR015300 -
Dere07g0817 833 ProSiteProfiles B3 DNA-binding domain profile. 235 337 IPR003340 GO:0003677
Dere07g0817 833 Pfam Auxin response factor 404 487 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dere07g0817 833 FunFam Auxin response factor 442 515 - -
Dere07g0817 833 Gene3D - 442 514 - -
Dere07g0817 833 SMART B3_2 235 337 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0817 Dere-ChrDere07 11701378 11706399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0817 123 805 B3 DNA Binding Superfamily AT4G30080 60.173 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Dere07g0817 B3 2.2e-21 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1070 08 14704178 14706983 Dere07g0817 07 11701378 11706399 CCT