Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0808 ATGGCCTTTGGAAATTCAAGATCTGTACGATTTCAAGATGATCTTGAACAAGCAAAAATCCCCACTACTAACTGTGAAAACGGGATCAAGCTGAAATACAACATTGATGGAGTACAAATACCAGAGCCTAGCAACACCAAAATGGATCAGAAGAAGGAGACAGGGAAGACTGGGAAGTTCTTGAAAGCTAGAGTATTGTCAAGAGTGTTCTCAGAGGACTACGAGAGAGTGAAAAGAAGAATACTAGATCCTCGAGGACAAGCCATTCACCGCTGGAACAAGATTTTTTTGGTAGCATGTTTAATATCTTTGTTTGTGGACCCTCTCTTCTTTTACTTGCCAGTAGTTCAAGATGAAGTGTGCATTGACATTGCAATAACAGTTGAAGTTATCCTCACAATCATCAGAACAGTTTCAGATATCTTTTATATGGTTCAGATTTTCATAAAGTTTCGTACAGCTTATGTTGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATAAATACTTCTAAGATTGCAATTAGGTACCTGAGCAAGAGTTTCTGGCTAGACTTCATTGCTGCCCTGCCTCTTCCTCAGGTGTTAATTTGGCTTGTCATCCCCTACCTTAAGGGTTCTACCATGACAAACACAAAAAATGTCCTTCGGTTTATCATCATTTTTCAGTATCTCCCAAGGCTGTTTCTTATTTTTCCACTTTCATCACAAATTGTAAAGGCTACTGGGGTTGTGACCGAAACAGCATGGGCAGGAGCTGCTTACAACCTGATGCTTTACATGTTGGCAAGCCATGTTATAGGAGCTTCCTGGTATCTTCTATCGATTGAACGACAAGAAGCATGCTGGAGAAGTGTTTGTGATATGGAAAAGTTATCCTGTCAATATGGATTCTTTGACTGTCACAGGGTCAACGAAGCCCGCAGAGTCTCCTGGTTCACAGCAAGTAATGTCACAAATTTATGCTCACCAGATGTCAATTTTTATCCGTTTGGCATGTACGGTGATGCAGTGACATCTGAAGTCACAAGCTCGCATTTCTTTAACAAGTATTTCTTCTGTCTCTGGTGGGGCTTAAGGAACTTGAGTTCTCTGGGACAAGGTCTTCTAACAAGCACTTTTGTTGGAGAAATAATATTTGCCATTATTGTTGCAACCCTCGGCTTGGTTCTTTTTGCATTGCTCATTGGTAATATGCAGACATACCTTCAATCAACAACAGTCCGCTTAGAAGAGTGGAGAGTCAGAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTACCTCCAGAATTAAGACAGTCCGTGAGGAAATATGATCAGTATAAATGGTTGGCTACACGAGGAGTTGATGAAGAGGCTCTTCTCAAAGGACTTCCAGTGGATCTTCGGAGAGACATCAAGCGCCACCTTTGCCTCGACCTTGTCCGAGGAGTCCCGTTGTTTGACCAAATGGATGAGAGGATGCTGGATGCAATATGTGAAAGGCTGAAGCCTGCATTGTGCACAGAGGGAACCTATCTAGTTCGTGAAGGTGATCCAGTGAACGAGATGCTCTTCATAATAAGAGGCCATCTTGATTCCTACACCACCAATGGAGGCCGAACCGGGTTCTTCAACTCATGCCGGATTGGTCCAGGTGATTTCTGTGGCGAGGAACTACTGACATGGGCTTTGGACCCTCGACCAAGTGTCATACTTCCATCTTCCACTCGAACAGTGAAGGCCATCTCTGAAGTAGAAGCCTTTGCACTCATAGCAGAGGACCTCAAGTTTGTGGCGTCTCAGTTCAGAAGACTACACAGTAAACAGCTTAGACACAAGTTCAGGTTTTACTCGCACCAATGGCGAACATGGGCTGCTTGCTTCATACAAGCTGCATGGAGAAGGTACAAGAAAAGGAAGGAAGTTGCAGAACTGAGGGCTAAAGTGAATCAATTAGATGCTGAGCCTGAAACACCAAATTCTGGGTCATCAGGCTTGGTTGTATATGGAACGAGGCTGGGTAGGAGCACTAGAAAAGGGGTTAATATGCATTCTGAGACAGATTCTGTTGTAAGCTCTTTGCAGAAGCCTGCAGAACCAGACTTTTCTGTTGATGAATAA 2115 0.434 MAFGNSRSVRFQDDLEQAKIPTTNCENGIKLKYNIDGVQIPEPSNTKMDQKKETGKTGKFLKARVLSRVFSEDYERVKRRILDPRGQAIHRWNKIFLVACLISLFVDPLFFYLPVVQDEVCIDIAITVEVILTIIRTVSDIFYMVQIFIKFRTAYVAPSSRVFGRGELVINTSKIAIRYLSKSFWLDFIAALPLPQVLIWLVIPYLKGSTMTNTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVIGASWYLLSIERQEACWRSVCDMEKLSCQYGFFDCHRVNEARRVSWFTASNVTNLCSPDVNFYPFGMYGDAVTSEVTSSHFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIIFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQWMHHRQLPPELRQSVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEVAELRAKVNQLDAEPETPNSGSSGLVVYGTRLGRSTRKGVNMHSETDSVVSSLQKPAEPDFSVDE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0808 704 CDD CAP_ED 484 615 IPR000595 -
Dere07g0808 704 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Dere07g0808 704 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere07g0808 704 MobiDBLite consensus disorder prediction 676 704 - -
Dere07g0808 704 MobiDBLite consensus disorder prediction 676 694 - -
Dere07g0808 704 SUPERFAMILY Voltage-gated potassium channels 84 406 - -
Dere07g0808 704 Coils Coil 633 653 - -
Dere07g0808 704 Gene3D - 94 408 - -
Dere07g0808 704 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Dere07g0808 704 Gene3D Helix hairpin bin 411 475 - -
Dere07g0808 704 SMART cnmp_10 484 615 IPR000595 -
Dere07g0808 704 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Dere07g0808 704 Pfam Cyclic nucleotide-binding domain 507 594 IPR000595 -
Dere07g0808 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 700 - -
Dere07g0808 704 ProSiteProfiles cAMP/cGMP binding motif profile. 484 581 IPR000595 -
Dere07g0808 704 SUPERFAMILY cAMP-binding domain-like 414 610 IPR018490 -
Dere07g0808 704 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere07g0808 704 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere07g0808 704 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere07g0808 704 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere07g0808 704 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere07g0808 704 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere07g0808 704 Gene3D Jelly Rolls 482 602 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0808 Dere-ChrDere07 11532300 11536048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0808 58 703 Ion Channels AT2G28260 76.780 0.0 1035