Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0806 ATGAAGCTCCAACTCGACGTGATTTTATCTTTTCTAATTTGCTTGCTTTTGATTCGACACTCACTTGGTGATCAACCTTCTGATACTTCTGGCCAAGGCCAATGGACATGTAGATGTTCTTTCAAAGGGAACCAGTACTCTATTGCTAATTGTTCTACATCGTGTGATTGTCGTCCAGATGCTGAAGAGAGTGGATCCATATGGACATGCATATGCGATCACAATGGGTTTCCTAAAGTGGCAGCAGATGGCCATAGTCCTAATTGCTTCACAGCCTGCAACTGCACCTGGGGAACTCTCAGCAAGTCGCTTGGTTCAAAAAAACACATTTCCAGCAAGATTATTGTAATCATCCTAGTAGTATGCGTTATATGTACAGCTATTGCCTCGTTCACATGCTGTGTCTGCCGAAGTGACCGATGTTCTATTCAAGCACCAATATTCTCATCTTATAAGGAAACAAATAGCAATAGTACCACCAAAATTAGAAATAGGAATTCTTCAGTGCCAGAAACAAAGGTTACCATAAATTCTCCCATTAATCGTTTTACAGGATGCTTTCAGAAGGCCTCTTTCTTATTTGGGAGCAGGACAGAAACTTTCCAAGGCAAAATAATTCAATTTTCATTTGCTGAACTGGAAAATGCAACTGAAAGCTTCTCAGCTTCCAACCTGATTGGACTAGGTGGAAGTAGCTATGTATATCGTGGTTGGTTGAAAAATGGTAGTAATGTGGCAATTAAGCGACTAAAATCTCAAGGAGGACCTGAAGCCGACTCTTTATTTTTGACAGAGATTGAACTATTATCTAGACTCCATCATTGCCATCTTGTGCCTTTGCTTGGATACTGCTCAGAACTAAAAGGGAAACATGTTGAGAGGCTACTAGTTTTTGAGTACATGTCCAACGGCAATTTGAGGAACTGTTTGGATGGAGTTTCTGGAGAAAATATGGATTGGGCTACTCGTGTTACCATTGCAATAGGAGCTGCAAGAGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTGAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGACCTTGGTATGGCTAAAAACTTGAGAGTTGATGACCCACCCAGCTCTTCCAATTCTCCCGCAAGAATGCAGGGAACGTTTGGCTATTTTGCACCTGAGTATGCAATTTTTGGAAGAGCCTCTCCTAAGTCAGATGTCTTTAGTTTCGGGGTGGTTCTTCTGGAGCTTATGAGTGGTCGGCAACCCATCCATGAATCCACAGGCAAAGAAGAAAGCCTTGTCATATGGGCTACACCACGTTTGCAAGATAGTAGACTAGTAATAACAGAGTTGGCTGATCCACGATTGAAAGGAAACCTCCCTGAAGAAGAGGTGCAGATAATGGCGTATTTAGCAAAGGAGTGTTTGCAGTTGGATCCTGATACTAGGCCAACCATGAGTGAAGTTGTTCAAATTCTTTCAACTATATCACCAGACAAACCTAGGAGGAGAATAAATTTCCCAGTGAGCCTTTTTCAGGAACCTCAGGATGCAGAAAAGCAAATTCAAGCTCCATCCAGTAAATCTTCAGATCAAAATTCATTGCCACTAGACATTGACCACAATTTTTGTGTTGGGAACGAAAATGAAGAAGCAGATACGGTTTCAGCTGCATATATGGAGAGTATGATCCTCTTTGCTTCTCAACAAGAGGGTTGGCATGCATCAGAGGATGAAATAGTAGACCTAACTGAGCCTCGGTTTGAAACATTTTGCCTGACAAACGGCAATTCCCCTTGA 1818 0.4175 MKLQLDVILSFLICLLLIRHSLGDQPSDTSGQGQWTCRCSFKGNQYSIANCSTSCDCRPDAEESGSIWTCICDHNGFPKVAADGHSPNCFTACNCTWGTLSKSLGSKKHISSKIIVIILVVCVICTAIASFTCCVCRSDRCSIQAPIFSSYKETNSNSTTKIRNRNSSVPETKVTINSPINRFTGCFQKASFLFGSRTETFQGKIIQFSFAELENATESFSASNLIGLGGSSYVYRGWLKNGSNVAIKRLKSQGGPEADSLFLTEIELLSRLHHCHLVPLLGYCSELKGKHVERLLVFEYMSNGNLRNCLDGVSGENMDWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRVDDPPSSSNSPARMQGTFGYFAPEYAIFGRASPKSDVFSFGVVLLELMSGRQPIHESTGKEESLVIWATPRLQDSRLVITELADPRLKGNLPEEEVQIMAYLAKECLQLDPDTRPTMSEVVQILSTISPDKPRRRINFPVSLFQEPQDAEKQIQAPSSKSSDQNSLPLDIDHNFCVGNENEEADTVSAAYMESMILFASQQEGWHASEDEIVDLTEPRFETFCLTNGNSP 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0806 605 SMART serkin_6 220 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0806 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Dere07g0806 605 FunFam receptor-like serine/threonine-protein kinase NCRK 194 300 - -
Dere07g0806 605 SUPERFAMILY Protein kinase-like (PK-like) 201 499 IPR011009 -
Dere07g0806 605 Pfam Protein kinase domain 222 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0806 605 ProSitePatterns Protein kinases ATP-binding region signature. 226 248 IPR017441 GO:0005524
Dere07g0806 605 CDD STKc_IRAK 226 499 - -
Dere07g0806 605 FunFam receptor-like serine/threonine-protein kinase NCRK 301 511 - -
Dere07g0806 605 Gene3D Transferase(Phosphotransferase) domain 1 301 513 - -
Dere07g0806 605 Gene3D Phosphorylase Kinase; domain 1 156 300 - -
Dere07g0806 605 ProSiteProfiles Protein kinase domain profile. 220 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0806 605 PANTHER OS01G0750732 PROTEIN 33 530 - -
Dere07g0806 605 MobiDBLite consensus disorder prediction 521 541 - -
Dere07g0806 605 MobiDBLite consensus disorder prediction 522 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0806 Dere-ChrDere07 11517825 11521765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0806 1 601 Receptor kinase-like Gene Family AT2G28250 51.639 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Dere07g0806 Pkinase 2.6e-44 CL0016