Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0803 ATGTTACAGCAGGAGAGCGCGAACGACGTCGTTGTAATGGGGGAAAACGAGAAGAGGATGAAGGAGATTAAGGATGCGTTGAAGTGGGAGGAAGCGGCGGAGTCGATGAGGGGGAGCCACGTGGAGGAAGTGAAGAGGATGGTGAGGGGTTACCGGAGGAGGGTGGTGAGGGTGGGAGGGGAGACGCTGACGGTGGGGCAGGTGGCGGCGGTGGCGGCGGCGACGGCGGAGGTGGAGCTGAAGGAGGGGAGGAGGGAGAGAGTGGAGGCGAGCAGCGCGTGGGTGATTGAGAGCGTGAGGAAAGGGACGGACAGTTATGGAGTGACAACGGGGTTCGGTGCGACGTCGCACCGGCGAACGAGGCAAGGGGTGGCGCTGCAAACTGAGCTCATCAGGTTTTTGAATGCTGGAATATTTGGGAATGGAACAGAGGCTTGCCATACGTTGCCATACAGTGCAACAAGAGCTGCAATGCTCGTAAGAATCAACACCCTCCTCCAAGGCTACTCTGGCATCAGATATCACATACTTGAAGCCATTGCAAAACTACTCAACCACACCATCACTCCATGCTTGCCCTTGCGTGGTTCAATTTCAGCCTCTGGGGACTTGGTCCCATTTTCGTACATTGCTGGACTATTGACAGGAAGGCCTAATTCAAAAGCCATTGGCCCCAACGGCGAGACCCTAAGTGCTTCCGAAGCCTTCCGTCTAGCTGGTATCCATGAAGGCTTCTTTGAGTTGCAGCCAAAGGAGGGTCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCTATAGTTCTCTTTGAGGCTAATATCTTAACCATTCTATCTGAAGTTATATCTGCAATTTTTGCTGAAGTTATGCATGGGAAGCCGGAGTTTACAGACCATTTGACACACAAATTGAAACATCATCCTGGGCAGATTGAAGCAGCAGCAATAATGGAACACATATTGGATGGAAGTGCTTATGTTAAAGCAGCGCAAAAGTTGCACGAGATGGATCCTTTCCAAAAGCCTAAGCAAGATAGATATGCTCTTCGAACTTCGCCACAATGGTTAGGTCCTCAGATTGAAGTTATCAGGTCATCAACAAAATCCATTGAGAGGGAGATCAATTCTGTGAATGATAACCCTTTGATCGATGTATCGAGGAACAAAGCTCTTCATGGTGGCAATTTCCAGGGTACCCCAGTTGGTGTTTCAATGGACAACACAAGATTAGCCTTGGCTGCGATAGGAAAACTCCTTTTCGCTCAAATGTCTGAGCTGGTTAATGATTTTTACAACAATGGATTGCCTTCAAACCTATCTGGGGGTCGTTGTCCGAGCTTGGATTATGGTTTTAAGGGTGGTGAGATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTATCTAGCAAACCCAGTCACTAATCACGTCCAAAGTGCTGAACAACACAATCAAGATGTCAACTCGTTAGGACTAATCTCTGCCAGGAAAACAGCTGAAGCTGTTGAAATATTGAAGCTTATGACTTCAACCTACTTGATTGCTCTTTGTCAAGCCATAGATTTGAGGCATTTGGAGGATAACTTGAAGAACGCTGTTAAGAATACAGTGAGCCAAGTGGCTAAGAAAGTCTTGACCGTGGGTGTAAACGGGGAGCTTCATCCTTCAAGATTTTGTGAGAAAGATTTACTCAAAGTGGTAGATCGTGAGCATGTTTTTGGCTATATCGATGACCCATGTATTGCTACCTCCCCTCTGATGGAAAAACTAAGGCAGGTGCTTGTGGAGCATGCATTGAAGAGTAATGATGGTTTGAAAAGTGGATATGCTTCCATATTCCTCAAGATCGGTGCCTTTGAGGAGGAACTGAAGACAGTGTTGCCCAATGAAGTTGAGTCTGCAAGAAAAGCATTTGAGAAAGGGAGTTCAGCAATTCCTAACAAGATCAAATATTGCAGGTCCTATCCACTTTACAAGTTTGTAAGGGAGGACTTGAGGACGGATTTTTTAACTGGAGAGAAGAGTAAGTCCCCAGGAGAAGATTTTGACACAGTTTTCACTGCAATTAGTGAGGGAAAGATGATTGATCCGATGTTTGAATGCCTCAAGGATTGGGATGGTATTCCTCTTCCAATATGTTAA 2145 0.4681 MLQQESANDVVVMGENEKRMKEIKDALKWEEAAESMRGSHVEEVKRMVRGYRRRVVRVGGETLTVGQVAAVAAATAEVELKEGRRERVEASSAWVIESVRKGTDSYGVTTGFGATSHRRTRQGVALQTELIRFLNAGIFGNGTEACHTLPYSATRAAMLVRINTLLQGYSGIRYHILEAIAKLLNHTITPCLPLRGSISASGDLVPFSYIAGLLTGRPNSKAIGPNGETLSASEAFRLAGIHEGFFELQPKEGLALVNGTGVGAGLASIVLFEANILTILSEVISAIFAEVMHGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRCPSLDYGFKGGEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMTSTYLIALCQAIDLRHLEDNLKNAVKNTVSQVAKKVLTVGVNGELHPSRFCEKDLLKVVDREHVFGYIDDPCIATSPLMEKLRQVLVEHALKSNDGLKSGYASIFLKIGAFEEELKTVLPNEVESARKAFEKGSSAIPNKIKYCRSYPLYKFVREDLRTDFLTGEKSKSPGEDFDTVFTAISEGKMIDPMFECLKDWDGIPLPIC 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0803 714 NCBIfam phenylalanine ammonia-lyase 26 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dere07g0803 714 FunFam Phenylalanine ammonia-lyase 261 567 - -
Dere07g0803 714 SUPERFAMILY L-aspartase-like 25 714 IPR008948 GO:0003824
Dere07g0803 714 PANTHER HISTIDINE AMMONIA-LYASE 22 714 IPR001106 -
Dere07g0803 714 Gene3D - 527 648 IPR023144 -
Dere07g0803 714 Gene3D - 16 260 IPR024083 -
Dere07g0803 714 FunFam Phenylalanine ammonia-lyase 16 260 - -
Dere07g0803 714 FunFam Phenylalanine ammonia-lyase 527 648 - -
Dere07g0803 714 Gene3D Fumarase/aspartase (Central domain) 262 708 - -
Dere07g0803 714 Pfam Aromatic amino acid lyase 63 538 IPR001106 -
Dere07g0803 714 CDD PAL-HAL 80 524 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0803 Dere-ChrDere07 11487269 11491659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0803 24 714 Monolignol Biosynthesis Gene Families AT2G37040 77.201 0.0 1142