Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0802 ATGGCAAATTCTGCAGGTTCTAGTCGTAAGGCTAAGGTTGATGAAAATAGCAATGGGAGGCGTGTCAGTGAGACATGCCCAATCAACTCAGGCGCTTCTATATCTGATGCAGCTGGTCTTAGAAGGTCTGCTAGAGAAATTACTTCAAAGAAGATGGGTCTTAGTCCTTCAAGTATTCGAAAGTCTGAGCGGCTTGAAAAGAGGACATCACTAAGTCCTGTAGTCAGAAGGAAATCTGAAAGGGTTGAGAAACAGAAGATGATAAGTCCTCTGAGGAGATCTAAAAGAACTAAGAATCACTCATCTTCAACTTCATTGGGCTCTAAGAGCTTGGGCTCATTAGTTTCAAAGCAGAAAAAGAAAAAAAAACAGAAAAGTGTAAAACAGTTAACATTTGAATCTGAAAATGACGAACATGATGTGGGAACTTCTCAAGTGAAAAGAAAGAGAATGAATGCTCGTGCTTACCGGGCTATGATAAAGAAAAAACCAAAAATAGATTGTCATGAGGAGTCAAATAGTGCGGATAATTTAATTCAAGATGGTGGCAATAATAATGGAGGCAAGATAGATGAGTGCTCCAAAGGGAGTCATTTGGATTGCAAAGAAGTCTCCAATAATGTTGTGCTACCATCTGATAATGGCATGGAATCAGTTAACCTTTCTGCAACTGAGGATAGAGGTGAAATTGGGGATGGCATCGCTGCAGAAATTTCTGAGAAAGGCATTGGCTGCATGCCACAAAAGGAAATCTCCGCAGAGATCCAAACACATGATGAAAAAATGTTTGTTTTTGTGTTGGAAATGGCTCATAGATGTCCGGTGGCTATTGATTTTAGGCTTGCGTGCACAGTAGATGCTAGTGGATTCTGTGATGGAAAAGGATGCAATGGATGCTACCATCCCTCTTGTCTTGAACCGCCCATGGTGGATGCTCCCCTCGGAGTTTGGCACTGTCATCTCTGCTCGAGGAGAAAGATAGAGTCAGGTGTATATTCCATGTCTGAGGGAGTAGAATCAATTTGGGATGCCCGAGAAGTTGTGGTTGACATTGATGGATTGACAACTGAGAAACAATTTCTTGTGAAGTATAAAGGCCTTGCTCATGTTCACAATCGCTGGGTCCCAGAAAGTCAGTTACTTCTTGAAGCTCCATTGCTGCTTAAGAAATTTAATCAGAAAGATCAGGCCCTAAGGTGGAAGCTAGAATGGAGCTTACCTCATCGCTTGCTTCAGAAGAGAGCATTAATCTCTGCCGAACAACGTGGTGATCCCTGGAGTGGCCAAACTGTTGATAATTCTGACTGTCATTATGAATGGCTTGTGAAATGGCGTGGTCTTGGTTATGAACATGCATCCTGGGAGTTGGACAATGCTTCATTTCTTCATTCGCCTGAGGGTCAGAGGCTAATTAAAGACTATGAAGGTCGTCGTCAGAGGGCAAAGAGAGTTTCTTTATTCTCCAAAGTAGGCAAGAAACCAGACCACGTAAGTTCTCTTAGCAAATTATCTCAGATGCCTTGTGGACTTTCACCTGGATTTGGCAACAACAATTTGGATGCAGTTAACAAGCTACGCGAGCATTGGCACAAGGGTCAGAATGCTATTGTAATTGATGACCATGACAGAATAGTGAAAGTGGTTGCATTTATCATATCATTGCACTCTGATACTTATCAGCCTTTCCTCATTATCCCAACTTCTGCTACTCTTCATTTATGGGAAGATGGGTTTTCTCGTTGGGCACCATCTGTCAATGCTGTTGTTTACAGTGGAGACAAAGAGATTCGTAAAAGCATTAGGAAAGTAGAATTTTATGAGGAAGGCGGTTGTTTCCTTTTCCAAGTACTAATAGTACTTCCAGAGATCATCATTGAGGATCTAGAGGTTTTAGGAGGCATAGAATGGGAAGCAATCATAGTTGATGAATGCCAGTGCCCAAAGATCTCATTCTATTTGAAACAAATTAAAATGTTAAAGACAGACTTGTGGATTCTACTTCTCAGCGGCCAACTAAAGGATAGCATTGTAGATTATCATAATATTCTGGCTCTTCTTGATCACCAGAGTTACAATGATGAGATTGATGAGTTAATATCTAATTCCAGTGATTGCCTTGGCCAACTGAAGGAGGGGCTCTCAAATTTTGTTGCATATAGATGCAAGTCAGACTCCTTTAGGTTTGTTGAGTATTGGGTTCCTGTAAAGATTTCCAATGTGCAGCTTGAGCAGTATTGTGCTACTTTACTTTCAAACTCTTCAACACTTCGCTCACCAACAAAAACTGATGTTGTTGGGGCCCTTCGGGACATTCTTATTACTACTCGAAAGTGTTGTAATCACCCCTATCTTGTTGATGAATCCCTACAAACTTTACTTATCAAAGATTGTCCACCAGTTGAGATCCTGGATGTTGGAATAAAAGCAAGTGGAAAGCTGCAACTACTTGATTCAATGCTCATGGAATTGAAAAAACAAGGTCTAAGGGTGCTTATTCTTTTTCAGGATTGTGAGGGTGGGTTCTGGTTAGATACTTCAAATCCTTTAAGTATTCAACAATATGGTCTGTCAATAGGTGGTTCTGGGAAGGTTTCAATAGGAGATATTTTGGATGACTTAATGCGTCAAAGATTTGGTCCAGATTCTTATGAACGGATTGACAAATGTGTTGTGCATTCTAAGAAGCAAAATGCTCTGAAAATGTTTAATAACAAGGACTATGGGAGATTTGTATTTTTGTTAGAAACAAATGCTTGCGTTCCAAGCATCAAATTGTCATCAGTTGATAGCATTATCATATTTGATAGTGATTGGAACCCATTGAACGATATTAGATCCCTTCAGAGAATAACACTTGATTCACAGTTCGAACGGATTAAAATATTTCGTTTATTTTCATCTTTCACTGTTGAAGAAAGAGCCCTAATCCTTGCTAAACAGGATAAGCCACTTGACAGCAATTTGCAGAACATAAGTTGGAGTATTTGTCATATGCTGTTAATGTGGGGGGCATCTTGTTTATTTGATGATTTAAAAGCTTTTCATGATGGTAAGACTGATGGCCTAAATGTAAATTCCTGGTCTGGAGAATTATTTTTGCAACAAGCTCTACATGATTTCTCATCTGTATTTAAGCGAGATGGTGAAGATAATGACACAAGAAACTGCTCAATTATATTGAAAGTCCAGCAAAATGGAGTAATGTACAGCCCAAATATTTCTTTAGTTGGTGAGTGGAAATTTGGGTCTCTGGATGTAGGCCCATCCCATTTGTTTTGGACAAGAGTTTTGAAGGGAAAAAATCCTCAGTGGAAATACTCATGTGGTCCATCTCAGCGGAGCCGGAAGAGGGTTCAGCATTTTGTTGGTTCAGGAAACAGACCTGATGTTGAGACTGAAGATATAGTAAAAAAGCGCACGAAGGTGATAAATAATGTTGTTGATCAATCTCATTCAAAATGTGAGGGTGAAAATTTATCTACTGGTACCAGGGAAGGAAATTCTGGAGATTCAGAAGGTAATGTTTCTCAATTCTTGTCTTGTTCAACTGTTTGTTTTGGTGATCCACTGCAGGCAAATCACACTTACTCATTTTGTTTGGCTGATCTGATGTCAGAAAGACCTCAAGGTAATGATTTTGAATATGAGAAAGTAAGGAAATTGCGCAATGAGCAGAGGAGCTTACACCTTTCACTGAAGTCAAACATAGCAAAGCTTTGTGAAGTTCTTCTTGTCCCAGATAAAGTCAAGATGACGACTGATGAATTTCTTGAATATGTCATGAACAATCACCATGTCAATAGGAAACCATCGTCAGTATTACAGGCTTTTCAAATATCTCTGTGTTGGACTGCATCTTCTTTGGTAAAGCACAAAATTGACCATGAAGCTTCCCTTATGCTTGCAAGACAGCATTTAAATTTTGACTGCAAGAAAGATGAGGCAGACTATATTTATTCAATGCTGCGATGTCTGAAGAAAATATTTTTGTACCGTACTGGAAATTCCCTGGTCTCTGCCTCTCCGAAAGCTTCTGATTCTGAATTATCAGATAGAAATTATTCCAGTACTGGCTTGGCACCAGAGGTTGAATTGGCCATGAAAGATGTCTCAAAAAGTATTAAAGAAATTCAAAAAAAGTGCCAGAAGAAGATGAGGAAGCTACTTCTTAAGCATCAAGAAGATAAGAATAAGTTGAATGCAACATATGAGGAAGAAAAGGCTGATCTTGAGAAAAAGTACAAAATAGAGTCTGCTGTTATTCGATCATGTACTCCCGGTGAAGTGATGAGAACGGAAAAGCTTAAGGCTTTAGATATGGAATACACTAGAAGAATTGAAGATTTGAAGTGCCGACATGAAATTCTTCTCAAAGATCTTGAGATTGCACAATTGGCAGCAAGGCAGAAGTACCATGATAGGGAGGCCACTTGGGTGGAAGATGTGAAGTCTTGGGCACGAGATGAATTGTTAAACATACTTCCTTCAAAAGAAAATGGGAATCAGATAGAATACTTGAAGAATAGTGAACAAGCTGAACGTGGCAATGGTTTAAAGAATATGTGCCATGTGTCCAGTCATGTTGCCAAGGGTACAAATTTTGATAGAATAGTTAGTGTTAATGGGGATCATGATAGAGCTCAAAATGCATCTGACAGTCAAGTGAAAATTATCTCTATGCATTCCCCTTCCAAAGAACAGAATTCCAATGGAGCCACAAGCATGATAAAGGAAGGGGAAGGACATAAAAATTCTAGTCATGATGGTCGTAGGGAGAAAACTGTGACTGATGGTTCAGAGAAGGATATAACTGTGGATCCTCCTTCGTCCATGGAACTAACTTCTGATGGTGGTGCATCAATTGTTTTAGATAGAGAGATATCAACGAGACTCTCTGGAAATCCAACCCTGCCAGAGGAGCAAACCTCTGATCGAGTCTTACTTCACATGCACAAAGAACAAATTCCAGTTGAAGTGCCTGAAACTAGTCATGAATTAGCTGAATGTTACAATGACAGAGAGCACCAAACAGATGTGGTGTTGGATAAAACTACAACATCAGATAGGCAGGAAGGATTGTCAAGAACCATGAACAATAATACTTCGTCTCAGGAGACTCCATTATTATCAAGCTTACCTTCACTGCAACCATTACTTATCTCATCCCCTGCAATATCTGTAAATGAGGCAACTTCATCAACATCCCCCAGAATGGTTGATAGAGAGGTGACAGTGGGAGATACGCTGAACTCTTTGCAGCCAATTGAGCCAGTATCTAGTACAGTTGATGTTTTACCAGCTGATCAATCTAATCCTGAGTCAGTCACGGAGCCTATAGAGCAAGTGCCGCAAATACCATCTGCAGAGTCCCTTACGCCTGAACAGGATACAGCTGGAGAAACACAGATCTCTCAGCATGTTGAGCCGATGTCTTCTTCAGTTGATTCTTTACCAGCTGGTCAATCTAATCGTGACTCAGCCATGGAGCCTCAAGAGCAAGTGCAGCAATTACCACCTGCAAATTCCCCTGCTTCTAACCTGGATACTGTCAGAGAAATGCAGAATTCTTCCCTGCAAGTTGAGCCAGTATGTAGACAAGTTAATGTAGCACCAGCTACTCAGCCTAATCATGAGTCACTGACCAGGGAACCTCTAGAGCAAGTGCTGCAATTACCATCTGCAGAGTCCCCTAATTCCACCCAGGATCCATCTAATTTTTCTTTGGCAACTGGGATTGAACTTCAGCCAAATAATGAAGATTCTCTTTCCAGCCATGTTCCTCAGGCATCCATGGAGTTTACAAATCAGGCTGTTGCTCAATCTGCCGCAAATTCTGAAATTGATCCACATACACCAGTTGGTGCATTCAGAATGCAATCTTCAGACACAAGAAATGTGTTCACTTCTCCAGAGATTAATAATCGTTATGTACAAACTGCAACCCAACTGGTGAACAGGATGCTTCCACCTTTGTACTCTGATCCCCTCAAAAATGAATTGGATAGATTGCGTAAAGAATCAGAGCATGCCATAAAAAACTATGAAGATATGAAATTGCAGTTGAAATCTGATTGTGAGAGGGAGTTAGAGGAAATTCGCAGGAAGTATGATATCAAATTACAGGAGAATGAGGTTCAGTTTCAACTGAAAAAGAAGAATCTGGATACAAGTCTCACTTTAGTTCACATGCATAAGATGTGCGCAGAGGCTTTTAGGTCTAAATGCATGGATCCTAAAGGATCTGGGGCATCAGGGATGCAGCAAGGCGAGGTGCCAGTTAAAGACTGGTGCAGCCACATGTCAGATGCAAGTTTTGGGCAGCTCTTGGTTCGGCCCTCAAGACAGCAAGGAGATGTTAGGCCTCCCCATTTTGCAAGTCCATCTAGGCCCCCTGTATCAACTACTCTGCAGACTATGATGCCACCCCTATCCACTGCGGCTAGCTCTCCAACCAGGTTGCCACCTATATCCACTACGACTATCTCTCAGATGGCTGGTTACAGTGCGTCAGCCATGTGCTCTGGTGTTTCAAGACCACCTCATATCAACTCCACTACATCTTCAGCAAACCATCAAGCTGGTAGTGGGTTCCGTACCACTCCACCACATCTCCAGCCTTACAGACCGTCAACATCTATGCCAGATGCTCGTCTCCCTACACTTCCGCCTGGGATGTCAAGGCAGCAAGTTCCTAATAACATTTCTCCAATTCCCTTTTTTCCTCTCCATCCTCAACCGACACTTCCAAACTATATATCTGATCCTCATAGTAGGGTGAATTGGCCTGAAATCCCTGTTGGACTACCCCCTCCTAACTTATCTGCCATGGAGCCAAATATGGATGCTAATATTCAACTGGTTATGAATGTGCCAGCCTTGTTACGCATGTCGAATGCGGCTTCATTGCACCAATCTGAGTTTGGTACCGATAGTAGCATGCGGGATAACTCTGTCCATCAAGCTACATCTGCTGACATATTTGCTTTAGTTTCTTGTGGGTTGGGGGTTTCTGACAAATTTAGGAGGGCTATTGTTGTACTGATGGTGAGGCCATTAGATTCTCTTTTGACTTTTGTTAAACGCGTTCTTGTAATTAACTGTTAG 7104 0.411 MANSAGSSRKAKVDENSNGRRVSETCPINSGASISDAAGLRRSAREITSKKMGLSPSSIRKSERLEKRTSLSPVVRRKSERVEKQKMISPLRRSKRTKNHSSSTSLGSKSLGSLVSKQKKKKKQKSVKQLTFESENDEHDVGTSQVKRKRMNARAYRAMIKKKPKIDCHEESNSADNLIQDGGNNNGGKIDECSKGSHLDCKEVSNNVVLPSDNGMESVNLSATEDRGEIGDGIAAEISEKGIGCMPQKEISAEIQTHDEKMFVFVLEMAHRCPVAIDFRLACTVDASGFCDGKGCNGCYHPSCLEPPMVDAPLGVWHCHLCSRRKIESGVYSMSEGVESIWDAREVVVDIDGLTTEKQFLVKYKGLAHVHNRWVPESQLLLEAPLLLKKFNQKDQALRWKLEWSLPHRLLQKRALISAEQRGDPWSGQTVDNSDCHYEWLVKWRGLGYEHASWELDNASFLHSPEGQRLIKDYEGRRQRAKRVSLFSKVGKKPDHVSSLSKLSQMPCGLSPGFGNNNLDAVNKLREHWHKGQNAIVIDDHDRIVKVVAFIISLHSDTYQPFLIIPTSATLHLWEDGFSRWAPSVNAVVYSGDKEIRKSIRKVEFYEEGGCFLFQVLIVLPEIIIEDLEVLGGIEWEAIIVDECQCPKISFYLKQIKMLKTDLWILLLSGQLKDSIVDYHNILALLDHQSYNDEIDELISNSSDCLGQLKEGLSNFVAYRCKSDSFRFVEYWVPVKISNVQLEQYCATLLSNSSTLRSPTKTDVVGALRDILITTRKCCNHPYLVDESLQTLLIKDCPPVEILDVGIKASGKLQLLDSMLMELKKQGLRVLILFQDCEGGFWLDTSNPLSIQQYGLSIGGSGKVSIGDILDDLMRQRFGPDSYERIDKCVVHSKKQNALKMFNNKDYGRFVFLLETNACVPSIKLSSVDSIIIFDSDWNPLNDIRSLQRITLDSQFERIKIFRLFSSFTVEERALILAKQDKPLDSNLQNISWSICHMLLMWGASCLFDDLKAFHDGKTDGLNVNSWSGELFLQQALHDFSSVFKRDGEDNDTRNCSIILKVQQNGVMYSPNISLVGEWKFGSLDVGPSHLFWTRVLKGKNPQWKYSCGPSQRSRKRVQHFVGSGNRPDVETEDIVKKRTKVINNVVDQSHSKCEGENLSTGTREGNSGDSEGNVSQFLSCSTVCFGDPLQANHTYSFCLADLMSERPQGNDFEYEKVRKLRNEQRSLHLSLKSNIAKLCEVLLVPDKVKMTTDEFLEYVMNNHHVNRKPSSVLQAFQISLCWTASSLVKHKIDHEASLMLARQHLNFDCKKDEADYIYSMLRCLKKIFLYRTGNSLVSASPKASDSELSDRNYSSTGLAPEVELAMKDVSKSIKEIQKKCQKKMRKLLLKHQEDKNKLNATYEEEKADLEKKYKIESAVIRSCTPGEVMRTEKLKALDMEYTRRIEDLKCRHEILLKDLEIAQLAARQKYHDREATWVEDVKSWARDELLNILPSKENGNQIEYLKNSEQAERGNGLKNMCHVSSHVAKGTNFDRIVSVNGDHDRAQNASDSQVKIISMHSPSKEQNSNGATSMIKEGEGHKNSSHDGRREKTVTDGSEKDITVDPPSSMELTSDGGASIVLDREISTRLSGNPTLPEEQTSDRVLLHMHKEQIPVEVPETSHELAECYNDREHQTDVVLDKTTTSDRQEGLSRTMNNNTSSQETPLLSSLPSLQPLLISSPAISVNEATSSTSPRMVDREVTVGDTLNSLQPIEPVSSTVDVLPADQSNPESVTEPIEQVPQIPSAESLTPEQDTAGETQISQHVEPMSSSVDSLPAGQSNRDSAMEPQEQVQQLPPANSPASNLDTVREMQNSSLQVEPVCRQVNVAPATQPNHESLTREPLEQVLQLPSAESPNSTQDPSNFSLATGIELQPNNEDSLSSHVPQASMEFTNQAVAQSAANSEIDPHTPVGAFRMQSSDTRNVFTSPEINNRYVQTATQLVNRMLPPLYSDPLKNELDRLRKESEHAIKNYEDMKLQLKSDCERELEEIRRKYDIKLQENEVQFQLKKKNLDTSLTLVHMHKMCAEAFRSKCMDPKGSGASGMQQGEVPVKDWCSHMSDASFGQLLVRPSRQQGDVRPPHFASPSRPPVSTTLQTMMPPLSTAASSPTRLPPISTTTISQMAGYSASAMCSGVSRPPHINSTTSSANHQAGSGFRTTPPHLQPYRPSTSMPDARLPTLPPGMSRQQVPNNISPIPFFPLHPQPTLPNYISDPHSRVNWPEIPVGLPPPNLSAMEPNMDANIQLVMNVPALLRMSNAASLHQSEFGTDSSMRDNSVHQATSADIFALVSCGLGVSDKFRRAIVVLMVRPLDSLLTFVKRVLVINC 2367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0802 2367 Pfam SNF2-related domain 545 785 IPR000330 GO:0005524|GO:0140658
Dere07g0802 2367 Gene3D - 518 727 IPR038718 -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 2114 2134 - -
Dere07g0802 2367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 331 IPR013083 -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1559 1616 - -
Dere07g0802 2367 SUPERFAMILY Chromo domain-like 295 396 IPR016197 -
Dere07g0802 2367 Gene3D - 1992 2074 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1559 1575 - -
Dere07g0802 2367 Gene3D - 332 396 - -
Dere07g0802 2367 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 526 690 IPR014001 -
Dere07g0802 2367 Pfam Chromo (CHRromatin Organisation MOdifier) domain 340 394 IPR023780 -
Dere07g0802 2367 Gene3D - 397 477 - -
Dere07g0802 2367 Coils Coil 1367 1387 - -
Dere07g0802 2367 PANTHER HELICASE PROTEIN MOM1 1 2318 IPR039322 GO:0031507
Dere07g0802 2367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 692 IPR027417 -
Dere07g0802 2367 Gene3D - 728 985 IPR027417 -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1685 1708 - -
Dere07g0802 2367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 729 982 IPR027417 -
Dere07g0802 2367 ProSiteProfiles Chromo and chromo shadow domain profile. 336 403 IPR000953 -
Dere07g0802 2367 Coils Coil 1997 2042 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1764 1847 - -
Dere07g0802 2367 SUPERFAMILY Chromo domain-like 432 477 IPR016197 -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 127 147 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1580 1600 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 60 90 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 2184 2199 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1 149 - -
Dere07g0802 2367 SMART chromo_7 403 479 IPR000953 -
Dere07g0802 2367 SMART chromo_7 343 396 IPR000953 -
Dere07g0802 2367 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 815 999 IPR001650 -
Dere07g0802 2367 Coils Coil 1389 1420 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 1690 1708 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 2184 2203 - -
Dere07g0802 2367 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0802 Dere-ChrDere07 11451359 11486871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Dere07g0802 SNF2_N 4.6e-09 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0802 07 11451359 11486871 Dere07g0802 07 11451359 11486871 ECH