Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0797 ATGAGCAACAAAAGACCCGAACCGCATGTAGCGCAACAAATTCGGCGTGACAAGTTGAGAATCCAGAATAGCCCCCAGCATTTAGAATATTTTCCTAACAATCTTGAACAATTGTCTTTACACCCAGGGTTCAATTCGGATCTTCTTCAAGTGAGGAATGTTAGAAATGCCAATATGCTTTACGAACCAGCTTTTTATTCGTCGGAGTTGGTCAATTTTTCGACGGCTTCGAATCCTTTATCTGAACCCAGTAGACTGATGATGATGCCTCAATTCGCTTCGTTCTCCTATTCATCAAACCCAGCTTCGTCCAGCATTCATTCTTACCCCGAAGAACAATGCGAAGTACGTAACTTAGGCAATTGGAGAAACAGTGGATCACAGCAAGGCTGTGATTGGATGATAAATTATGCCACTAGTTCTGGGGCTAACGAAAGCAATCCTAATCCTAATTCCTCTTTTGTCATGGAAATCAATAATGCACTCGCAGGTGTACAGTCTTCTCTGAACAATCCGTCATGTGAAACGGCGACTCGAGAAAGCCAAAGGCAATTAGGGGAAATTCATCCGAACACTTTGCAGGATATAATCAAGTCAGCTTCTATCAGTGGGCAAGGGTCAGAAATGGCTTCACTGATGCAGCAAACTGGCCATGGCATTTGGGCGGAAAACGGCAATCAACTTTCATATCTCCCAAACGATGGAATCCAATCAAATCAGTTGCGTCTTGGAAAGCCGAGTTCTTGGACAAATCGAACGGTTGAGAATTCCCTCCGTTGTAAAAAGAGTAATGAGCGCTCGGGTCCTCCCGTGAGCGATTCCAGTAATCAGGGCTTATCTTTATCACTTTCATCAAATGCACAATATGCACCTTGCGGATCCGGAGACCCGCAATCGCGATGTGTTGTTTCTAAGGATCCTCAATACTCTAGGTCTGTGAGATCTGCTTCAAATCCCTCTTTCATTGCTGCGGATTATGGCAAATCGCTTCAAAACACCATGGTGGTGGGAATACCTTCTTCAAACATTGGTTATCGAGATGTGGGACCGCTAGGCCCTTTCACGGGGTATGCTACCATATTGAAGAATTCGAATTTCTTGGAGCCAGCCCAACAGTTGTTAGATGAGATCTGTGGTCAAACTAGTGAAAAACTAATCAAAGGGTGTGATGTTTCTGGGAGGATATCTGAAGAAGTTGGTGCTTCTACTTCTGCTGACGCTGCTAATGCAACAAAAGAAAGTGGGGTCAGCGCAAAGGATTGTAATTCGGGTGCTTCGTCCTCCATTTTTCATAGTTCTAGTGGGAATGAAAACAGTGGTGATGTTGGAGCTGGGAGTAGTTCACGCGTTTCTTCTCGGCCAGAGTATCAACAAAGAATGGCAAAGTTTCTGTACATGCAAGAGGAGGTTATAAGAAGATACAAGCAACATCATCAACAAATGCAGATTGTTGTTTCATCCTTCAAGTCCGTAGCAGGTCTTGGCTCTGCTACTCCTTACATCTCCAAGTCTCTCAAGTTAGTATCAAGACAGTTCAGATGCCTAGAAAATGCTATCTCAGATCAGCTCAAGCATGTAAGAGAAGTTTTGGGAGAAGAATTGTCTGCATCCAACATTGATATTGGTGCCAGTACTATTGGTAAACTCGACAGCAATATGGCACGGCTAAGGTTCTTGGACCAAAGCTTTCAAAAGAACAAATTCATTGTAGGTAATACAGGCTTTCTTGAACACCAACGGCATGCCTGGAGGCCCCAGCAGAAAGGCTTACCAGAACGTGCGGTGGCAATTCTTAGAGCTTGGTTGTTTGAGCATTTTCTTCATCCGTACCCCACGGACGCTGATAAACACATGTTGGCTGCTCGAACAGGTCTTTCACGAAACCAGGTATCAAATTGGTTCATAAACGCTCGTGTACGTGTTTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACGAAAGGGTTGGCGAGTGACAATCAGAACAGTAAAAACGATGGAACTTCTGCCACTGAAGGTGCCAACGAGTCTCGAGTTAATCATCCTGTGAGCAATAATCAATTCCAGTGTGTGGAAATAGGTTCTGAAGACAGCATTGTAGGGGAGGTAGAGGAATTAGACGCCGAACAGTGGAATCAAGAGAAGCGATCTAAACTGGATTGTCAGATTACATCAAGCATGAGTGGGACATTAATGGGTTTTGTGCCATACCGAAGGGGTGAGGTAGAGATTGGGGGAGTTGGACTTGGATCTGTGTCATTAACGTTGGGTCTCAGGCACGACGACGTTGAAGGTTTTCAACAACACCAGCAACAGCAATTACAGCAGCAGCAACAGCTTAGACGCCACTTTATGATCAATGACTTTGTTGGCTAA 2379 0.4443 MSNKRPEPHVAQQIRRDKLRIQNSPQHLEYFPNNLEQLSLHPGFNSDLLQVRNVRNANMLYEPAFYSSELVNFSTASNPLSEPSRLMMMPQFASFSYSSNPASSSIHSYPEEQCEVRNLGNWRNSGSQQGCDWMINYATSSGANESNPNPNSSFVMEINNALAGVQSSLNNPSCETATRESQRQLGEIHPNTLQDIIKSASISGQGSEMASLMQQTGHGIWAENGNQLSYLPNDGIQSNQLRLGKPSSWTNRTVENSLRCKKSNERSGPPVSDSSNQGLSLSLSSNAQYAPCGSGDPQSRCVVSKDPQYSRSVRSASNPSFIAADYGKSLQNTMVVGIPSSNIGYRDVGPLGPFTGYATILKNSNFLEPAQQLLDEICGQTSEKLIKGCDVSGRISEEVGASTSADAANATKESGVSAKDCNSGASSSIFHSSSGNENSGDVGAGSSSRVSSRPEYQQRMAKFLYMQEEVIRRYKQHHQQMQIVVSSFKSVAGLGSATPYISKSLKLVSRQFRCLENAISDQLKHVREVLGEELSASNIDIGASTIGKLDSNMARLRFLDQSFQKNKFIVGNTGFLEHQRHAWRPQQKGLPERAVAILRAWLFEHFLHPYPTDADKHMLAARTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGLASDNQNSKNDGTSATEGANESRVNHPVSNNQFQCVEIGSEDSIVGEVEELDAEQWNQEKRSKLDCQITSSMSGTLMGFVPYRRGEVEIGGVGLGSVSLTLGLRHDDVEGFQQHQQQQLQQQQQLRRHFMINDFVG 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0797 792 CDD homeodomain 590 645 IPR001356 GO:0003677
Dere07g0797 792 SMART HOX_1 579 648 IPR001356 GO:0003677
Dere07g0797 792 MobiDBLite consensus disorder prediction 400 453 - -
Dere07g0797 792 MobiDBLite consensus disorder prediction 657 682 - -
Dere07g0797 792 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 257 667 - -
Dere07g0797 792 MobiDBLite consensus disorder prediction 239 257 - -
Dere07g0797 792 ProSiteProfiles 'Homeobox' domain profile. 603 644 IPR001356 GO:0003677
Dere07g0797 792 SMART prehox3 355 521 IPR006563 -
Dere07g0797 792 Gene3D - 587 649 - -
Dere07g0797 792 SUPERFAMILY Homeodomain-like 590 650 IPR009057 -
Dere07g0797 792 Pfam Associated with HOX 360 520 IPR006563 -
Dere07g0797 792 MobiDBLite consensus disorder prediction 239 314 - -
Dere07g0797 792 FunFam BEL1-like homeodomain protein 9 587 649 - -
Dere07g0797 792 Pfam Homeobox KN domain 601 640 IPR008422 GO:0003677|GO:0006355
Dere07g0797 792 MobiDBLite consensus disorder prediction 267 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0797 Dere-ChrDere07 11369890 11374286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0797 361 761 Homeobox Transcription Factor Family AT4G34610 37.905 1.32e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dere07g0797 POX 4.2e-34 No_clan