Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0788 ATGAACAACGAAATTTGGAAGGTTGCTTTGGTTTTCATTGTTGCATTAAGCTGCTATGCGGGACAAGTTTCGTCTCAGGAAACCAAAAAAAATCCAGCTGCGGTTCAGCTCGTCGCCCAGGCCGTATACGGAAGCATGTCTAGTTTCACGGGCGTCTTCAAGGACGAAATAAAAAAGAATTTGGGTTTTTGCATTATTGATGTGGATGCTGATTGGGATGGGGCGTTTAATTTCACAAATGATCTGACATTTTTGACCTCATGTTCCCAGACTTTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCGGAAATAAAGTTCTATGCCAGTGGTTTTGATATAAAGTCAAAGGGCAAATCTAGCAACTTGCAGCCCAACAAGAACTGTAATTTGAGCGTTTGGCTTAACGGATGTGAGCCTGGATGGGGCTGTAGTGCTGCTGAGAAAGTACAACTTAACAATTCCAAGGACATCCCTATCAGATCTACTGACTGCCAGCCTTGTTGTCCGGGTTTCTTTTGCCCACGTGGCATCACTTGCATGATACCTTGCCCATTGGGTGCTTACTGTCCACGTGGACAGCTCAATCAAGGTACCGGAGTGTGTGAACCATATCGTTATCAGCTACCTGCTGGAAAGACAAACCACAGTTGTGGGGGAGCAGATGTTTGGGCAGACATTTCGAGTAGTTGGGACGTATTCTGTTCAGGAGGATCATACTGTCCGTCTACTATCGAAAAAAACCCTTGTACTTCAGGACATTACTGCAGGACGGGTTCAACTGAACAAGAGAGTTGTTTCAAACTGGCAACTTGTAAGCCTCAATCAGCTAATCAGAATATTACTGCATATGGTGTTATGGTTTTTGCTGGCTTGAGCTTTTTGCTTATCATCATATATAACTGTTCGGACCAAGTTCTTGCAACACGAGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCCGCAAGTGTAAGAGAAACACAAGCCCGTGAAAAATGGAAATCTGCAAAAGATATTGCTAAGAAGCATGCAGTAGGACTGCAAACTTCTTTATCACGTACATTTTCTCGTAGAAAATCTATGAAGTCAGATCTGAAAGCTTTTGGTTCTAAATCTGCAGCAGATGTTCCCGTACCACCTGCGTCTCCAGGAACTGCTGGTACATCCTCTGCAGGATCTAAAGGAACGAAAAAAGATAAGAGCAACCTCACAAAAATGATCCAAAAAATTGAGGAAGACCCTGATAGTCAGGAAGGCTTTAATGTTGAGATAGGAGATAAAAATATCAAAAAGCAAGCACCAAAGGGTAAGCAATTGCATACTCAGAGCCAAATTTTTAAGTATGCCTATGGTCAGATTGAAAAAGAAAAGGCTTTACAGGAACAAAATAAGAACCTGACCTTCTCCGGAGTTATTTCAATGGCTAGTGATATTGAGATCAGGAAGAGGCCTACAATTGAAGTTGCTTTTAAAGATTTAACCCTCACTTTGAATGCAAAAAACAAGCATCTTTTAAGATGTGTGACTGGGAAACTACATCCTGGTCGAGTTTCGGCGGTCATGGGCCCATCTGGGGCTGGGAAAACAACATTTCTTTCTGCTTTAACAGGAAAAGCAACTGGATGTCATACAACTGGTTTAGTTCTCATAAATGGCAAGGTTGAATCTATCCGGTCATACAAGAAGATAATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGACTCTCGGCTGATCTACCGAAACCAGAGAAGGTTCTAGTAGTTGAAAGAGTCATTGAGTCTTTAGGTCTGCAGGCAATCCGAGATTCTCTGGTTGGAACAGTGGAAAAACGCGGAATCTCTGGAGGTCAAAGGAAACGTGTGAACGTAGGACTGGAAATGGTCATGGAACCTTCACTGCTGATTTTAGATGAGCCAACGTCTGGTTTGGATAGTTCATCCTCTCAGTTACTGCTTAGAGCACTTAGACGTGAGGCTCTAGAAGGTGTAAATATATGTATGGTCCTTCATCAACCAAGTTACACACTGTTCAAGATGTTTGATGATTTTATACTGCTAGCTAAAGGTGGTCTTACAGTGTATCATGGACCGGTGAAGAAAGTTGAAGAGTATTTTTCCAGCTTGGGGATTGTTGTTCCCGAGCGTGTTAATCCTCCAGATTACTACATTGACATTTTAGAAGGGATAGTAAAACCAAGCTCAAGTACGGCAGTAGACTATAAACAGTTACCTGTTAGATGGATGCTTCATAATGGGTACCCAGTTCCCTTGGACATGCTACAGGGTGTTGAAGGAATGGAAGGCGCAAGTGGTGAAAGTTCAACACATGGCGCAGCTACTCAACCAGAAGCAACCGAGGATCCATCTTTAGCTGGAGAACTTTGGCAGGATGTAAAAGTCAATGTTGAGAAGAAGAAGGACTTCCTACGACATACTTTTTTTTCTTCAAATGATCTATCTAATCGTATAACCCCAGGAGTGTTCCAACAATATAGATACTTTCTTGGAAGGTCTGGCAAGCAGCGGTTACGGGAAGCTAGAACACAAGCTGTAGATTATCTAATTTTGTTATTAGCTGGAATCTGCTTAGGAACACTTGCCAAAGTGAGTGACGAAACATTTGGAGCAAATGGTTATACATACACCGTTATAGCAGTATCACTCCTGTGCAAGATTGCGGCCTTGAGAACGTTTTCACTGGATAAGTTGCACTACTGGAGGGAGAGTGCGTCCGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACAGTCGACCACTTTAATACACTCATAAAGCCTGTAGTCTATCTCTCAATGTTCTACTTCTTCAACAATCCTAGATCATCTGTTGTAGATAACTATTGTGTTTTGCTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCGCGCTTGAACCTGGTCCCGCCCAATTGTGGTCAGTGTTACTTCCTGTAGTTTTGACTCTCATAGCAACCAGTGATAGTGTAGCCGATAACCCATTTATGAGCAAGATATCCGAACTTTGCTACGCAAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGCGGTGCACTCTCTCTCCGTGGCTACGATCTCAACAACTGGTACCGATGTCTTATTTTTCTTGTGGTAACCGGAGTAGTTAGTCGCGTTGTTGCATTCTTTTGTATGATGACCCTCCAGAAGAAATAA 3300 0.4261 MNNEIWKVALVFIVALSCYAGQVSSQETKKNPAAVQLVAQAVYGSMSSFTGVFKDEIKKNLGFCIIDVDADWDGAFNFTNDLTFLTSCSQTLKGDISQRICTAAEIKFYASGFDIKSKGKSSNLQPNKNCNLSVWLNGCEPGWGCSAAEKVQLNNSKDIPIRSTDCQPCCPGFFCPRGITCMIPCPLGAYCPRGQLNQGTGVCEPYRYQLPAGKTNHSCGGADVWADISSSWDVFCSGGSYCPSTIEKNPCTSGHYCRTGSTEQESCFKLATCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQTSLSRTFSRRKSMKSDLKAFGSKSAADVPVPPASPGTAGTSSAGSKGTKKDKSNLTKMIQKIEEDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDIEIRKRPTIEVAFKDLTLTLNAKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKPEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVKKVEEYFSSLGIVVPERVNPPDYYIDILEGIVKPSSSTAVDYKQLPVRWMLHNGYPVPLDMLQGVEGMEGASGESSTHGAATQPEATEDPSLAGELWQDVKVNVEKKKDFLRHTFFSSNDLSNRITPGVFQQYRYFLGRSGKQRLREARTQAVDYLILLLAGICLGTLAKVSDETFGANGYTYTVIAVSLLCKIAALRTFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYCVLLCLVYCVTGIAYILAIALEPGPAQLWSVLLPVVLTLIATSDSVADNPFMSKISELCYAKWALEAFVISNAKRYAGVWLISRCGALSLRGYDLNNWYRCLIFLVVTGVVSRVVAFFCMMTLQKK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0788 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 731 IPR003439 GO:0005524
Dere07g0788 1099 SMART AAA_5 516 717 IPR003593 GO:0016887
Dere07g0788 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 728 IPR027417 -
Dere07g0788 1099 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524|GO:0016887
Dere07g0788 1099 CDD ABCG_EPDR 488 714 - -
Dere07g0788 1099 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Dere07g0788 1099 MobiDBLite consensus disorder prediction 385 399 - -
Dere07g0788 1099 Pfam ABC transporter 510 659 IPR003439 GO:0005524
Dere07g0788 1099 Gene3D - 479 728 IPR027417 -
Dere07g0788 1099 MobiDBLite consensus disorder prediction 784 806 - -
Dere07g0788 1099 Pfam ABC-2 type transporter 688 1099 IPR043926 GO:0140359
Dere07g0788 1099 FunFam ABC transporter G family member 24 484 726 - -
Dere07g0788 1099 MobiDBLite consensus disorder prediction 368 403 - -
Dere07g0788 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 240 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0788 Dere-ChrDere07 11248869 11254865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0788 517 720 Calmodulin-binding Proteins AT2G36910 28.700 1.10e-10 64.3