Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0762 ATGACTCAGTTAAGAGGATACCAAGCAGTGAAAGAAGATAGCTTACTCTTCAGTGGTGCGATGGAAGGAAGCAACATTAAGGGGAAGAATGAAAGGCGAGAGCTCAAGTTCAAATCATTGAGCAATCCCACCACAACTCATCACCCATGCAACGTCGGTAGAGCCAAGAGGAGGACAACGAAGCTTTGCTGCCTTGACGAAGAGTTAGGGATGTCGTTGAATGTGCGTTTATTATTTGGTGCAAAGATAGCAAAGGAATTAGGATTTGATTATCCCTGTGACGTAAAACTTGGTGAATACCATGCCAATTGGAATCATAGAATTGGGTACCTGTTATGGGTTAATGAAGGAGACGATGTTGAAGGCTTAAACGAGGATTATATTGTGGGTGGCAATCCTTATGGGAATGATGAGCTACCCTGTGATCTTGGGAGTGAAGGATGCTCACGGCGTCGTTTGAGGGGCTGCCGGTTGAAGCACCCAGCGAATAGGCCAACGGCGACGAGGACAGGCCGGAAAGGGACGAACGGCGGCGAGCTTGGACGGTGGAAGGAGAAAAAGCGGACAGGCTGGACAAAATCTTTCTATGGCGGCGGGAGAGGGACTCAAGTACGTGACGTGAGGCTGGGGAGGCAATTTAGTCATTTCACAGCATTAAATGCCACGTGTCGTTCTGTAAAAAGGACCCACAACCCTTTGCCGCGAAACCCTAGATCTGTTTCCTTCTCCCATTGTTTCCATTCGTCTCTGGTCTCTTTCTTCGCTTCTCTACTCTCCAAGATGGTGTCTGACGCGAGTAAGAAGAAGGCAGCGCAGAAGAAGGCGGCTGCTGCTGCTAAGAGAGGAGGCAAGGCAGCTGCTGCCGCTGCTTCATCAAAAGCAGCCGCGGAGTCTCAGAAGGCGGCTGATAAGCTTGCCAATGGAATTGGGGATATTCAGATATCTGATCGGACTTGTACCGGCGTCCTCTGCTCCCATCCTCTCTCTCGGGATATTAGGATAGAGTCTCTATCAGTTACCTTCCATGGTCATGATCTCATAGTTGATTCAGAATTGGAGCTGAATTATGGAAGACGTTATGGTTTGCTTGGATTAAATGGTTGTGGAAAATCTACCCTGCTTACCGCCATAGGTTGCCGAGAGCTTCCTATTCCGGAGCACATGGACATTTATCACCTTACTAGGGAAATTGAGGCTTCTGACATGTCTGCATTGGAGGCTGTGATAAGCTGTGATGAGGAAAGGTTGAAATTAGAGAAAGAAGCTGAAGCTTTGGCGGCACAGGATGATGGAGGTGGTGAAGCTCTTGATCGTATTTACGAACGATTGGATGCCATGGATGCATCAACTGCTGAAAAGCGTGCTGCTGAAATCTTAAATGGTCTTGGTTTCAACAAGCAGATGCAGTCAAAGAAGACTCGTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCATTAGCACGAGCATTATTTATGAACCCAACCATTCTTTTACTTGACGAACCAACCAATCACCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAAAGTTTGAAAAAGTTTGATCGCATTCTGGTTGTGGTTTCACACTCCCAGGATTTCCTTAATGGGGTCTGCACAAACATCATCCATATGCAAAACAGAAAGCTCAAACTCTACACTGGTAACTACGACCAATATGTTCAGACACGTTCTGAACTGGAAGAAAACCAGATGAAGCAGTACAAGTGGGAACAGGATCAAATTGCTTCAATGAAGGAATATATTGCCCGATTTGGGCATGGCTCAGCAAAATTAGCTCGTCAAGCACAAAGTAAAGAAAAAACACTGGCAAAAATGGAGAGGGGTGGACTTACAGAGAAGGTGGTTAGAGATAAAGTTCTTGTATTCCGTTTTGTGGATGTGGGAAAGCTTCCTCCTCCTGTCCTTCAGTTTGTTGAGGTATCATTTGGTTACACTCCTGATAATCTAATCTACAAGAACATTGACTTTGGGGTTGACTTAGACTCTAGGGTTGCTCTGGTTGGACCCAATGGAGCTGGAAAGAGTACACTTCTGAAGCTAATGACAGGTGATCTGGTTCCTATTGATGGCATGGTCCGACGGCATAATCATCTTCGAATTGCACAATATCACCAGCACTTGGCTGAGAAACTAGACCTGGAATTGTCTGCCCTCCTGTTCATGTTGAAAGAGTACCCTGGAAATGAGGAAGAGAAGATGAGGGCAGCTATTGGGAGGTTTGGACTGACAGGTAAAGCCCAGGTGATGCCCATGAAGAATTTGTCTGATGGGCAGAGAAGCCGTGTTATTTTTGCATGGTTAGCTTGGAGGCAACCTCACTTGCTGCTACTGGATGAGCCAACTAACCATTTGGATATTGAGACAATTGACTCGTTGGCTGAAGCTTTGAATGAATGGGATGGTGGCATGGTGCTTGTCAGCCATGATTTTAGGCTTATAAATCAGGTAGCCCATGAGATATGGGTGTGTGCAGATCAATCTGTGACTAGATGGGAAGGTGACATTATGGATTTCAAGCAGCATCTTAGGTCAAAGGCTGGTTTATCTGATTGA 2577 0.461 MTQLRGYQAVKEDSLLFSGAMEGSNIKGKNERRELKFKSLSNPTTTHHPCNVGRAKRRTTKLCCLDEELGMSLNVRLLFGAKIAKELGFDYPCDVKLGEYHANWNHRIGYLLWVNEGDDVEGLNEDYIVGGNPYGNDELPCDLGSEGCSRRRLRGCRLKHPANRPTATRTGRKGTNGGELGRWKEKKRTGWTKSFYGGGRGTQVRDVRLGRQFSHFTALNATCRSVKRTHNPLPRNPRSVSFSHCFHSSLVSFFASLLSKMVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAAESQKAADKLANGIGDIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLTREIEASDMSALEAVISCDEERLKLEKEAEALAAQDDGGGEALDRIYERLDAMDASTAEKRAAEILNGLGFNKQMQSKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQYVQTRSELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKVLVFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPIDGMVRRHNHLRIAQYHQHLAEKLDLELSALLFMLKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQSVTRWEGDIMDFKQHLRSKAGLSD 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0762 858 ProSitePatterns ABC transporters family signature. 476 490 IPR017871 GO:0005524|GO:0016887
Dere07g0762 858 SMART AAA_5 668 856 IPR003593 GO:0016887
Dere07g0762 858 SMART AAA_5 356 558 IPR003593 GO:0016887
Dere07g0762 858 Gene3D - 332 596 IPR027417 -
Dere07g0762 858 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 332 572 IPR003439 GO:0005524
Dere07g0762 858 Pfam ABC transporter 659 790 IPR003439 GO:0005524
Dere07g0762 858 FunFam Abc transporter f family member 1 332 596 - -
Dere07g0762 858 FunFam ATP-binding cassette sub-family F member 3 603 857 - -
Dere07g0762 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 837 IPR027417 -
Dere07g0762 858 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 858 IPR003439 GO:0005524
Dere07g0762 858 Pfam ABC transporter 543 619 IPR032781 -
Dere07g0762 858 CDD ABCF_EF-3 643 834 - -
Dere07g0762 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 578 IPR027417 -
Dere07g0762 858 Coils Coil 550 570 - -
Dere07g0762 858 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 274 853 - -
Dere07g0762 858 MobiDBLite consensus disorder prediction 161 181 - -
Dere07g0762 858 Gene3D - 614 855 IPR027417 -
Dere07g0762 858 CDD ABCF_EF-3 332 549 - -
Dere07g0762 858 Pfam ABC transporter 350 504 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0762 Dere-ChrDere07 11033244 11044329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0762 643 836 Calmodulin-binding Proteins AT2G36910 26.339 1.56e-09 60.1