Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0756 ATGGGAAGAGCTCCGTGTTGTGACAAAGCAAATGTGAAGAAGGGGCCATGGTCACCAGAAGAGGACTCCAAGCTGAAAGAGTACATAGAGAAGAATGGTACCGGAGGGAATTGGATCGCTCTTCCTCAAAAAGCAGGTCTAAAGAGGTGTGGGAAAAGTTGCAGACTGAGGTGGCTAAACTATCTGAGGCCCAACATTAAGCATGGGGAATTCTCTGATGAGGAAGACAGAATAATATGCAGTCTCTATGCCAATATTGGAAGCAGGTGGTCAATTATAGCAGCTCAGTTGCCAGGCAGGACAGACAATGATATCAAGAACTATTGGAACACCAAGCTCAAGAAGAAGCTCATGGGTCTGCTTCCTCCTTCTCATCCTCAGATCAGGAAACCTCCCACGTTTCAATCCTCTCATCATGATCAAAACCCACCATTTAGTTCTCCCTCTCAATCATACAGAGACTTTAGTCCTTACTACACTAGCCCATCGTCAACTATATCCTTCGCAGGCCTTGAACCCTCTTCTTCTGTGCCTCCTTCAAGTTATAATAATAGAACTATATCATCAACCAACTTCCCTTATTTCCAAAACCAAGAAGCCTCCTTGGTTGGTGGTCCCATGCAATACTACTACATGTTTGGAAGCGAAGGAAGTTGCAGCACTTCATCTGATGGAAGCTGCAGTCAAATCAGCCATGGTAGAGGAGGAGACATCAAACAAGAAGAAATGGGTCTTCAATTTCATCACAACTATATGTCCAATGGCGGTGGGCTTGAATTAGAGTTCAGCAACAAGTTCATACCTGGAGGTGAAAATATTATTAACCAGTGGACAGAGAAGCCGTGTGGGTATATTGGGCAAACCCCATTAATGGATTATGGAATTGACGATATAAAGCAGATGATTAGTAGTAATAATGGGGTGTTTAATAATATTGAGGAAAACAAGAGAGAGGAGAAGGGGATGATGTACTACTACTACTGA 984 0.4329 MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKNGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPPSHPQIRKPPTFQSSHHDQNPPFSSPSQSYRDFSPYYTSPSSTISFAGLEPSSSVPPSSYNNRTISSTNFPYFQNQEASLVGGPMQYYYMFGSEGSCSTSSDGSCSQISHGRGGDIKQEEMGLQFHHNYMSNGGGLELEFSNKFIPGGENIINQWTEKPCGYIGQTPLMDYGIDDIKQMISSNNGVFNNIEENKREEKGMMYYYY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0756 327 CDD SANT 70 111 IPR001005 -
Dere07g0756 327 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Dere07g0756 327 SMART sant 13 64 IPR001005 -
Dere07g0756 327 SMART sant 67 115 IPR001005 -
Dere07g0756 327 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Dere07g0756 327 MobiDBLite consensus disorder prediction 130 151 - -
Dere07g0756 327 Gene3D - 70 142 - -
Dere07g0756 327 Gene3D - 7 68 - -
Dere07g0756 327 FunFam Transcription factor RAX3 7 68 - -
Dere07g0756 327 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Dere07g0756 327 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Dere07g0756 327 PANTHER OS09G0431300 PROTEIN 1 282 - -
Dere07g0756 327 CDD SANT 16 62 IPR001005 -
Dere07g0756 327 MobiDBLite consensus disorder prediction 120 151 - -
Dere07g0756 327 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dere07g0756 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Dere07g0756 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Dere07g0756 327 FunFam Transcription factor MYB36 70 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0756 Dere-ChrDere07 10992749 10994247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0756 1 119 MYB Transcription Factor Family AT5G57620 90.756 8.14e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0756 Myb_DNA-binding 1.5e-13 CL0123