Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0737 ATGGCGAACGGTAAGGATTCGGACGAGTTCGTGGTGTTATCGCGGGTCCGGACGGGTCTGAAGAGGGAGTTTGCATTCGCCATGAAGGCTCAATCCGAGATCTGTGGATCTTTGGGTCGGACCCGTGGTAGCAAGAACAGGAATGGGGTTCATGATAGTCCGAGCAGCAAGAGGTCCAAGAAATCTGGTTCGTCAGGGGCTCAGAAAGATGAGCAGAATGGACCGAAGCCTGAAGAGGTGAAGGGAAAAGAGTTAAAGCCCGTGGAGGATGTGGATGATTCTATGAGCGAGGAGGAGGCAAAAAGCGACGTGGTTGATCTCTCGAGCGACGAGGAACCCAAGAACCTAGGGGGAGAAACGATGGGAAAGAGGGAGACTGCAAATGACGCTGCAGTGCCCATTTGTGAAGAGGAACCCAAGAGCGATGTTGTGGAAACTGTGAGCGACGATGAGCCCAAAAGTAGTCCAATGTTAGAATCTTCGAAGGAAGCAACAATGGATGATATGGCACAACCCATTTGCCAAGACGGGACCAAGGAAAATCAAACTGATGAAGCTGATTTGCAGAAGCCGTTGACGACTGAGAGCTTGAGCAGGGGGGAGACATGTTATCCAGACGAAAATGTTGTAAATGGGACAAGCCCTGTTTCTCTTAATGATGACAACGAGGTGAAGGCCATGATAGGGAAACCACCAAGGCGGTTTACGCGGTCCGCACTGAGACAAAAGGAAGATGATTCGAAGCTCACAAGCGATGGGAAGAACGCTTGCGATAGAGTAACCGGAATTGGTGCTGATGTTAATAGGGAGAATGCAGATGGTCCATTAATTACAACGCCAACTCAAATTAAAATGTCGAAGAAGAGTACCTTGAAGAAGTTCCCAACGAAGCTAAAGGACCTTCTAGCCACAGGGATTCTTGAGGGACTACCAGTCAAATATCTCCGGGGAGTGAAGGCACGAAGGCCTGGTGAAACAGGGCTCCGTGGAGAGATTAGAGGATCAGGGATCGTGTGCTATTGCGAAGTCTGTAATGGGGTTGAGGTCGTCACACCTACCGTGTTTGAGCTTCATGCTGGCAGTGCAAACAAACGCCCCCCGGAGTATATATACCTTGAGAATGGGAATACCCTCCGTGATGTCATGAATACATGTTCGAATGTTCCAGTGGATGTTTTGGAGGATGCAGTACAGAAAGTCCTTGGGGGTTTCCCCATGAAGAAATCTGCAATATGTTTGAAGTGCAAAGTGTCTATATCTCAAGCTGGCAAGGGATTGTCAAGACTACTTTGCCATACATGCATGGAATTGAAAGAGTCTCAACCTACACCTATTCAAATAGCTGAGACTAGCAAGCGCTGTGCTTCACCTGCAGCTACTCCGAGCTATCCCAGGTCACCGGAACAAGTTGCTGTCCCAAAGTCATTAAACAGTGGGATGAAGCACAGCACTTCTCGTGGTAAGAGTCAGGGAAGAATAACTAAGAAGGATCTACGTTTGCATAAATTGGTTTTTGAGGAAGATGTGTTGCCAGATGGAACTGAAGTAGCCTACTATGCTCGTGGACAGAAACTGTTGGTGGGTTACAAAAAGGGATTTGGAATAGTTTGTAGCTGCTGCGACTCTGAGGTCAGCCCTTCTCAATTTGAAGCTCATGCTGGTTGGGCATCGCGACGCAAGCCTTATCTGCACATATACACATCCAATGGAGTCTCTCTCCATGAATTGTCCATATCTCTATCAAAAGGTCGGAAGTTTTCGACCAATGAAAATGATGATCTCTGTAGCATATGTTCAGATGGAGGGAATCTTTTATGTTGTGATGGATGCCCAAGGGCTTTTCACATAGATTGTGTTCCTCTTGTACGCATTCCAACTGGTACTTGGTATTGTAAATATTGCCAGAACTTGTTCCAGAAAGACAAATATGTGGAGCATAATTTGAATGCAGTGGCAGCGGGAAGGATTGCAGGCATTGATCCTTTAGAACAGATAAACCAGAGATGCATTCGCATTGTCAAAACTGTAGAGGTTGACCATGGTGGATGTGCATTATGCAGAAGCCATGATTTCAGCAAAAGTTTCGGTCCTCGCACAGTTATTATTTGTGATCAGTGTGAAAGGGAATATCATGTTGGCTGTTTGAAGGAGCACAACATGCAGAACTTAGAGGAATTGCCTGAAGGAAATTGGTTCTGCTGCACAGATTGCAGTCAGATTCATTCTGCTCTGCTTAATCTGGTCTCTTGTGAGGAGAAGCTTCCAGATTCCTTACTAAGTATGATACAAAAGAAGCATGAAGAAAAGGGTCTGGAAACTGGGGCTGGTCTGGATATAAAATGGAGGATCTTAAATTGGAAACTGGCATCTTCTGATGAAACCAGGCAACTGCTTTCAAAGGCCGTTGCAATCTTCCATGAGCGATTTGATCCGATAGTTGATTCTACTTCAGGCCGTGATTTCATTCCAACAATGCTTTATGGAAGGACCATCAAGGGTCAAGATTTTGGTGGAATGTACTGTGCAGTGCTGACAGTCAATCGGGTGGTTGTTTCGGCAGGGGTATTTCGAATATTTGGGACAGAAGTGGCAGAGCTTCCCTTAGTGGCAACTGTCACAGATTGCCAAGGACAGGGTTACTTCCAGTCCTTGTTTTCTTGCATTGAGAGGCTGCTTGGGTCTTTAAAAGTGAAACAGTTTGTCTTACCTGCTGCTGATGAAGCTGAATCAATATGGACCAGTAAATTCGGTTTTACAAAGTTAGACCAAGATGAGATAAACAATTATAAGAAATATTATCACATGATGATATTTCAAGGGACATCAGTGCTGAGGAAAGCAGTTCCTGCATGCTGA 2856 0.4576 MANGKDSDEFVVLSRVRTGLKREFAFAMKAQSEICGSLGRTRGSKNRNGVHDSPSSKRSKKSGSSGAQKDEQNGPKPEEVKGKELKPVEDVDDSMSEEEAKSDVVDLSSDEEPKNLGGETMGKRETANDAAVPICEEEPKSDVVETVSDDEPKSSPMLESSKEATMDDMAQPICQDGTKENQTDEADLQKPLTTESLSRGETCYPDENVVNGTSPVSLNDDNEVKAMIGKPPRRFTRSALRQKEDDSKLTSDGKNACDRVTGIGADVNRENADGPLITTPTQIKMSKKSTLKKFPTKLKDLLATGILEGLPVKYLRGVKARRPGETGLRGEIRGSGIVCYCEVCNGVEVVTPTVFELHAGSANKRPPEYIYLENGNTLRDVMNTCSNVPVDVLEDAVQKVLGGFPMKKSAICLKCKVSISQAGKGLSRLLCHTCMELKESQPTPIQIAETSKRCASPAATPSYPRSPEQVAVPKSLNSGMKHSTSRGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIVCSCCDSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSKGRKFSTNENDDLCSICSDGGNLLCCDGCPRAFHIDCVPLVRIPTGTWYCKYCQNLFQKDKYVEHNLNAVAAGRIAGIDPLEQINQRCIRIVKTVEVDHGGCALCRSHDFSKSFGPRTVIICDQCEREYHVGCLKEHNMQNLEELPEGNWFCCTDCSQIHSALLNLVSCEEKLPDSLLSMIQKKHEEKGLETGAGLDIKWRILNWKLASSDETRQLLSKAVAIFHERFDPIVDSTSGRDFIPTMLYGRTIKGQDFGGMYCAVLTVNRVVVSAGVFRIFGTEVAELPLVATVTDCQGQGYFQSLFSCIERLLGSLKVKQFVLPAADEAESIWTSKFGFTKLDQDEINNYKKYYHMMIFQGTSVLRKAVPAC 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0737 951 MobiDBLite consensus disorder prediction 471 487 - -
Dere07g0737 951 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 837 934 IPR016181 -
Dere07g0737 951 MobiDBLite consensus disorder prediction 234 255 - -
Dere07g0737 951 MobiDBLite consensus disorder prediction 72 90 - -
Dere07g0737 951 SUPERFAMILY FYVE/PHD zinc finger 582 637 IPR011011 -
Dere07g0737 951 MobiDBLite consensus disorder prediction 35 220 - -
Dere07g0737 951 Pfam Tify domain binding domain 528 576 IPR032308 -
Dere07g0737 951 Pfam Tify domain binding domain 330 385 IPR032308 -
Dere07g0737 951 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 677 740 IPR013083 -
Dere07g0737 951 MobiDBLite consensus disorder prediction 98 119 - -
Dere07g0737 951 SMART PHD_3 682 738 IPR001965 -
Dere07g0737 951 SMART PHD_3 594 635 IPR001965 -
Dere07g0737 951 MobiDBLite consensus disorder prediction 237 253 - -
Dere07g0737 951 FunFam PHD finger family protein 778 947 - -
Dere07g0737 951 CDD PHD1_AIRE 594 634 - -
Dere07g0737 951 Gene3D - 778 946 - -
Dere07g0737 951 ProSitePatterns Zinc finger PHD-type signature. 595 634 IPR019786 -
Dere07g0737 951 MobiDBLite consensus disorder prediction 456 492 - -
Dere07g0737 951 Pfam PHD-finger 595 636 IPR019787 -
Dere07g0737 951 PANTHER AUTOIMMUNE REGULATOR 60 948 - -
Dere07g0737 951 MobiDBLite consensus disorder prediction 187 220 - -
Dere07g0737 951 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 581 658 - -
Dere07g0737 951 SUPERFAMILY FYVE/PHD zinc finger 674 738 IPR011011 -
Dere07g0737 951 MobiDBLite consensus disorder prediction 135 149 - -
Dere07g0737 951 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 581 658 IPR013083 -
Dere07g0737 951 ProSiteProfiles Zinc finger PHD-type profile. 592 637 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0737 Dere-ChrDere07 10786276 10793341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0737 266 948 PHD Transcription Factor Family AT2G36720 45.382 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dere07g0737 TDBD 2.4e-15 No_clan