Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0712 ATGGAGGACCAAAATTGTACAGTCGTTCAGTCTTTGAACTCCCCACAGAACCACCCACCCATGAGTCCGGCGAGGACGGCGGACATCAACACCGTGCCAGTTGTAATGGGAGCTGTCGGAGTCGATAACTCCTTCGGAGGAGGAAAACCCGAGCCTTTCGGTTCGGAAGGGGTGTTGAAGAGGAGAAGGGGAAGGCCTCGAAAGAACGGTGTTGGTGGGAACCTTCTGTCTCCAGCGTCGGCGCCTTCGGGCTTTTCGACTCCCCCGTTACAAAGCTCAGCTAAGCGAGGCAGAGGAAGGCCACGTGGCTCCGGAAAATTGCAGCTTTTGGCTTCCATGGGTGGAATTGTTTCAGACACAGCTGGGGGAAGCTTCACCCCTCATGTAGTGACTGTGAATACTGGAGAGGATGTGGTCGCCAGGATATTATCGTTTTCTCACAGAGGCCCTCGAGCTCTTTGCATACTTTCTGCTACTGGTGCTGTATCCAATGTCACCATTTGCCAACCTAAATCTTCCAGTGGTACTTTGAGATATCAGGGTTGCTTTGAGATACTATCTTTATCTGGATCATATACCTTAGGCGACGTTGTTGGTCGTGCACATCAGAAAAGTCTCATCATGAGTATATCACTGGCTAAACCTGATGGGAGGGTCTTTGGAGGTGCTGTTGAGGGTCCGCTGATAGCGGCTGCCCCTATTCAACTAATTGTGGGCAGTTTCAAGCAAAATATCAGTAATGAAATTAAAAGAAGGCTTTCACCTGCATCTGCTATTGCTGCCAATATGCCTGATGGTCCAGGTTCAATGAGGCCTCCCTTACAAGTTCCTAAAATGATAGAAGCTGAACCGGGTTTCCCTTCGCCAACTTCTGGACTGATGCCAACATCTAACGGGTTACAAGACAATGTCATGCCTGGAAGATCTAGTGGATTACCAAACATTATCACTTCTGCGACAGCTAATGGATTACCAGATAACTTCTTTCCCGAGAATCATCAGAACATGCACTCTGCCTCCTTAAATGGTGTTGGCCTAGACTGCCAGGTCCTGCAGCCCATGACAGACCAAATGACATTCGGAGATCTTAATAACAGTGTCCCTCAGATATGA 1113 0.4888 MEDQNCTVVQSLNSPQNHPPMSPARTADINTVPVVMGAVGVDNSFGGGKPEPFGSEGVLKRRRGRPRKNGVGGNLLSPASAPSGFSTPPLQSSAKRGRGRPRGSGKLQLLASMGGIVSDTAGGSFTPHVVTVNTGEDVVARILSFSHRGPRALCILSATGAVSNVTICQPKSSSGTLRYQGCFEILSLSGSYTLGDVVGRAHQKSLIMSISLAKPDGRVFGGAVEGPLIAAAPIQLIVGSFKQNISNEIKRRLSPASAIAANMPDGPGSMRPPLQVPKMIEAEPGFPSPTSGLMPTSNGLQDNVMPGRSSGLPNIITSATANGLPDNFFPENHQNMHSASLNGVGLDCQVLQPMTDQMTFGDLNNSVPQI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0712 370 MobiDBLite consensus disorder prediction 43 106 - -
Dere07g0712 370 Gene3D - 127 260 - -
Dere07g0712 370 ProSiteProfiles PPC domain profile profile. 122 262 IPR005175 -
Dere07g0712 370 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 244 - -
Dere07g0712 370 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 242 IPR005175 -
Dere07g0712 370 MobiDBLite consensus disorder prediction 79 93 - -
Dere07g0712 370 CDD DUF296 126 241 IPR005175 -
Dere07g0712 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 296 IPR039605 GO:0003680
Dere07g0712 370 MobiDBLite consensus disorder prediction 1 25 - -
Dere07g0712 370 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0712 Dere-ChrDere07 10487389 10490410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0712 59 252 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 51.282 2.09e-52 176