LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g0711	ATGAGTCTTGGGCTGCCCTTGCTTACAGATTCAGAAACAGAGAAGAAGAAGAAGAAGAGGATGGGTTCGCTGCTTCCGACCTCAACCCTCGTCCATGAAGCAGAGAATCCAGGAGCTTCTCAACTCCTTCATCAACCCCAAAATGATGTTGATGCAGGCGCTCTCTTCGTCCTTAAGTCCAAGGGATCGTGGGTGCACTGTGGTTATCACCTAACAACGTCAATAGTTGCTCCTCCACTGCTGAGTCTGCCATATGCATTCACCTTCCTGGGATGGACAGCTGGCATCATCTGCTTGGTTGTTGGAGCTGTGGTTACTTTCTATTCCTACAATTTGATATCTCTGGTTCTGGAACATCATGCTCAGCAAGGTCGTCGCCAGCTCCGATTCAGAGACATGGCTCGCGACATCCTAGGGCCAGGATGGGGTCGGTATTTTGTGGGGCCTATTCAATTCGTAGTCTGCTACGGCGCCGTAGTGGCCTGTACTCTTCTTGGAGGACAGTGCATGAAGGCAATATACCTGGTGTCAAACCCATTTGGGAGTATGAAGCTCTATGAGTTCGTGATAATATTTGGATGCTTCATGCTAATTTTAGCTCAAATCCCATCATTTCACTCGTTGAGGCACATTAACATGGTGTCTTTGGTTCTGTGCTTAGCCTACAGTGTTTGTGCTACTGCTGGTTCCATCTATATTGGAAACTCCTCCGAAGGCCCAGAAAAGGATTATTCTCTGAAAGGGGATGCAGAGAATCGTGTATTTGGAATCTTCAATGCCGTTGCCATCATTGCCACCACATATGGAAACGGAATAATACCAGAAATCCAGGCAACATTAGCACCACCTGTAAAAGGAAAGATGTTCAAGGGACTCTGTGTTTGCTACACTGTACTTACAGTAACTTTCTTCAGCGTTGCCATCTCTGGTTACTGGGCATTTGGCAACGAAGCTGCTGGCCTCGTTTTAACCAACTTCGTGGACAACGGGAGGCCATTGGTGCCCAGGTGGTTTATTTATATGACCAACGGTTTCACCATAGCCCAACTATCAGCTGTTGGTGTGGTTTACTTGCAGCCTACAAATGAAGTGCTGGAGCAAGCATTCGGGGATCCAAAAAGCCCGGAGTTCTCCATCCGCAACGTGATCCCCAGAGTGATTTCTCGCTCATTAGCTATGGCTATGGCAACAGTTATAGCTGCAATGATTCCATTTTTTGCAGACATAAACTCACTGATCGGTGCTTTTGGATTTATGCCTCTTGACTTCATCTTGCCTGTGGTTTTCTTCAACCTGACATTTAAGCCATCCAAGCGAAGCCCCATTTTCTGGTTGAATGTAACTATTGCTTTAGTTTTCTCTGCTTTGGGAGCTATAGCAACTATTTCAGCAGTCAGGCAAATTGCCATTGATGCTAAAGATTACAGATTGTTTGCTAATCTATGA	1446	0.4613	MSLGLPLLTDSETEKKKKKRMGSLLPTSTLVHEAENPGASQLLHQPQNDVDAGALFVLKSKGSWVHCGYHLTTSIVAPPLLSLPYAFTFLGWTAGIICLVVGAVVTFYSYNLISLVLEHHAQQGRRQLRFRDMARDILGPGWGRYFVGPIQFVVCYGAVVACTLLGGQCMKAIYLVSNPFGSMKLYEFVIIFGCFMLILAQIPSFHSLRHINMVSLVLCLAYSVCATAGSIYIGNSSEGPEKDYSLKGDAENRVFGIFNAVAIIATTYGNGIIPEIQATLAPPVKGKMFKGLCVCYTVLTVTFFSVAISGYWAFGNEAAGLVLTNFVDNGRPLVPRWFIYMTNGFTIAQLSAVGVVYLQPTNEVLEQAFGDPKSPEFSIRNVIPRVISRSLAMAMATVIAAMIPFFADINSLIGAFGFMPLDFILPVVFFNLTFKPSKRSPIFWLNVTIALVFSALGAIATISAVRQIAIDAKDYRLFANL	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g0711	481	MobiDBLite	consensus disorder prediction	1	21	-	-
	Dere07g0711	481	Pfam	Transmembrane amino acid transporter protein	61	465	IPR013057	-
	Dere07g0711	481	PANTHER	OS05G0424000 PROTEIN-RELATED	51	459	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g0711	Dere-ChrDere07	10479931	10486466	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g0711	154	481	Organic Solute Cotransporters	AT1G08230	66.667	2.17e-155	443