Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0701 ATGGGAATCCAGCGTGTAAGAGAGAGAGGGAAGAGAGAGAGAGGGGGTAGCTTGACGTTCCCTTCTCCACAAGAGAACACCAAGCTACCCTCTCCCTTTCTTCTTCTTCTTCTTTTTCTTCTTCTCATTTTCTATTTTCATACCCATTTCTGTCTTCTTCTTTTCTCTACGCTCCTCGAAATGCAGTCTCTTTCTCCTCACCCTTCCCATTCTCTCAACTACCTCTTACACGCCCGCCCCTCCGCAACTCGGGTGGCTCCGACCCGAATTGCTGTCAAATGTGCTTATGGCTTCGAAGCCTCCGGGTTTCAACACGGCTTCGGCTCCACCCGAGCCGACTGGCAGAGCTCCTGTGCTATCTTAGCTAGTAAGGTCTCCCAGGAGCAATCCTCCAACGACGCCAACAACGGCAGCACCGCCGATCATATCGCTGCCGTCAACGGCCACAAGGCCGCCGTGACGGATCTCAACCTTGTCCACATCGGTGATTTAGAAGGTAGCGACAATAACAAGCCCATACCGCCGAAGCCTCTCAGTATTTCGGACCTCTCTCCGGCTCCGATGCACGGGTCACAGCTGCGCGTGGCATACCAGGGCGTTCCTGGAGCGTACTCTGAAGCGGCCGCCGGCAAGGCCTACCCGAATTGCGAAGCTATTCCTTGCGACCAATTCGAGGTGGCTTTCCAGGCCGTACAGCTCTGGATCGCCGATCGAGCTGTTCTCCCCGTGGAGAACTCGCTCGGTGGTTCGATCCACCGGAACTACGACCTCCTCCTCCGCCACCAGCTCCACATCGTCGGCGAGGTCCAACTTCCCGTGCACCACTGCCTGCTTGCGCTCCCCGGGGTTCGGAAAGAGTATCTAACCCGCGTTATCTCGCATCCGCAGGCCCTCGCGCAGTGCGAGCACACGCTAACCAAACTCGGCCTCAACGTGGCACGCGAGGCCGTGGACGACACTGCCGGCGCGGCGGAGTTCGTCGCCGCCAACAACCTGCGCGACACGGCGGCAATCGCGAGCGCACGCGCGGCGGAGCTCTACGGATTGCAGGTTTTAGCAGACGGGATCCACGACGACCCTAGTAACGTGACCCGATTCGTGATGCTGGCCCGGGAACCCATAATCCCGCGTACGGACAGGCCGTTCAAAACGAGCATAGTGTTCGCGCACGATAAGGGGACGTCGGTGCTGTTCAAGGTGCTATCAGCGTTCGCGTTCAGGAACATAAGCCTGACGAAGATCGAGTCAAGACCTCACCGGAGCCGTCCGATTAGGGTGGTGGACGACGAGAATGTGGGGACCGCGAAGCACTTCGAGTACATGTTCTACGTCGATTTTGAAGCTTCAATGGCGGAGGTTAGGGCACAGAATGCCCTAGCAGAGGTTCAGGAGTTCACTTCTTTCTTGAGGGTTTTGGGAAGCTATCCTATGGACATGACTCCGTGGAGCCCCTCTTCGTCTTGCCCTAGGGGAGATTAG 1479 0.5747 MGIQRVRERGKRERGGSLTFPSPQENTKLPSPFLLLLLFLLLIFYFHTHFCLLLFSTLLEMQSLSPHPSHSLNYLLHARPSATRVAPTRIAVKCAYGFEASGFQHGFGSTRADWQSSCAILASKVSQEQSSNDANNGSTADHIAAVNGHKAAVTDLNLVHIGDLEGSDNNKPIPPKPLSISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVQLWIADRAVLPVENSLGGSIHRNYDLLLRHQLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVAANNLRDTAAIASARAAELYGLQVLADGIHDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDENVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSSCPRGD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0701 492 ProSiteProfiles Prephenate dehydratase domain profile. 194 371 IPR001086 GO:0004664|GO:0009094
Dere07g0701 492 CDD PBP2_Ct-PDT_like 194 373 - -
Dere07g0701 492 MobiDBLite consensus disorder prediction 1 15 - -
Dere07g0701 492 ProSiteProfiles ACT domain profile. 385 476 IPR002912 -
Dere07g0701 492 SUPERFAMILY ACT-like 366 478 IPR045865 -
Dere07g0701 492 CDD ACT_CM-PDT 383 476 - -
Dere07g0701 492 Gene3D - 189 277 - -
Dere07g0701 492 Gene3D - 278 359 - -
Dere07g0701 492 FunFam Arogenate dehydratase 378 479 - -
Dere07g0701 492 ProSitePatterns Prephenate dehydratase signature 1. 347 369 IPR018528 GO:0004664|GO:0009094
Dere07g0701 492 FunFam Arogenate dehydratase 277 359 - -
Dere07g0701 492 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 95 485 - -
Dere07g0701 492 Gene3D - 378 479 - -
Dere07g0701 492 SUPERFAMILY Periplasmic binding protein-like II 194 377 - -
Dere07g0701 492 ProSitePatterns Prephenate dehydratase signature 2. 411 418 IPR018528 GO:0004664|GO:0009094
Dere07g0701 492 Pfam Prephenate dehydratase 195 373 IPR001086 GO:0004664|GO:0009094
Dere07g0701 492 MobiDBLite consensus disorder prediction 1 23 - -
Dere07g0701 492 FunFam Arogenate dehydratase 189 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0701 Dere-ChrDere07 10373295 10374901 Dispersed/Wgd