Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0686 ATGTCCAGAGGGCTGCAAAAGATGAAGCAGAAGCTTCTTCGAGTTAGCTCCCCGACGAGCAGCGATTCTGATTTTGAACTACAGTATGGACAGAAACAAAGACGATATGTCGCGGCTCTAGCGTCCACTCTTACAGGGGAAATGAGGACACTGTACAATTCAGGAGGCAATCTTATCAATTTACGATTTTGCCACTGTCCTCGACTTCTCAACCTGAACGCCTCATTTCTTGTTCCTTCATCGCAAATCCCATACCTTTCTCTCAGAAACACCACTCCTCCTGCAATTTCCTGCAAACATCGTCTCTGTTCTCCGTCTGGGTGGTCGTTGATTCGAGCATCGATGGCGTCTTCTACCTCATCCACTGACACTCGCAGCGACCCAAAGCCATTCTCTGTGCTCTTTGTTTGCCTTGGCAACATCTGCAGGAGCCCAGCTGCTGAAGGGGTCTTCAGGGACTTGGTCAAGAAAAGGGCTTTAGATTCCAAGTTCTATATTGATTCTGCCGGCACCATTAATTACCATGAGGGAAATGAAGCAGACCCGAGGATGAGAGCGGCCTCAAAAAGGCGAGGAATTGAGATAACCTCTATTTCTAGGCCAATCCGGCCATCTGATTTCAAAGATTTCGATCTTATTCTTGCTATGGACAAGCAAAACAGAAAGGACATATTGGAGGCATTCAATAGATGGAAGTTTAGAGATCCTTTACCAGCTGATGCACATAAAAAGGTTAAATTGATGTGCTCATATTGTAAGATACATGACGAAACTGAAGTCCCAGATCCTTACTATGGCGGACCCCAAGGGTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCTTGCCGATCATTGTTGGACGACATTTTGGCAGAGAATAAAGATTTACAGGAATGA 897 0.4537 MSRGLQKMKQKLLRVSSPTSSDSDFELQYGQKQRRYVAALASTLTGEMRTLYNSGGNLINLRFCHCPRLLNLNASFLVPSSQIPYLSLRNTTPPAISCKHRLCSPSGWSLIRASMASSTSSTDTRSDPKPFSVLFVCLGNICRSPAAEGVFRDLVKKRALDSKFYIDSAGTINYHEGNEADPRMRAASKRRGIEITSISRPIRPSDFKDFDLILAMDKQNRKDILEAFNRWKFRDPLPADAHKKVKLMCSYCKIHDETEVPDPYYGGPQGFEKVLDLLEDACRSLLDDILAENKDLQE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0686 298 CDD LMWPTP 132 287 - -
Dere07g0686 298 SMART LMWPc_2 131 288 IPR023485 -
Dere07g0686 298 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 102 294 - -
Dere07g0686 298 SUPERFAMILY Phosphotyrosine protein phosphatases I 129 289 IPR036196 -
Dere07g0686 298 FunFam Low molecular weight protein-tyrosine-phosphatase 130 294 - -
Dere07g0686 298 Gene3D - 113 294 - -
Dere07g0686 298 PRINTS LMW phosphotyrosine protein phosphatase signature 176 192 IPR017867 GO:0004725|GO:0006470
Dere07g0686 298 PRINTS LMW phosphotyrosine protein phosphatase signature 260 275 IPR017867 GO:0004725|GO:0006470
Dere07g0686 298 PRINTS LMW phosphotyrosine protein phosphatase signature 133 150 IPR017867 GO:0004725|GO:0006470
Dere07g0686 298 Pfam Low molecular weight phosphotyrosine protein phosphatase 133 286 IPR023485 -
Dere07g0686 298 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0686 65 293 Protein tyrosine phosphatase (PTP) family AT3G44620 55.849 2.94e-89 265