Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0684 ATGAAGGTGATAGCTGCGTATTTGCTAGCAGTGTTGGGAGGGAACACATCACCTTCGGCCGATGATCTGAAGGATATTCTTGGCTCAGTTGGGGCTGAGGCTGATGATGAGAAAATTGAGTTGCTCTTAAATGAAGTTAAGGGCAAAGATGTTACCGAACTAGTTGCCGCAGGAAGAGAAAAGTTGGCTTCAGTACCATGTGGCGGAGGTGCAGTTGCCGTTGCTGCACCTGTAGCTGGTGCTGCAGCTGGTGGGGGTGCTGCACCTGCTGCAGAGACAAAGGAGGAAAAGAAGGTGGAAGAGAAAGAGGAATCTGATGAGGACATGGGTTTCAGCTTATTCGACTAG 348 0.4971 MKVIAAYLLAVLGGNTSPSADDLKDILGSVGAEADDEKIELLLNEVKGKDVTELVAAGREKLASVPCGGGAVAVAAPVAGAAAGGGAAPAAETKEEKKVEEKEESDEDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0684 115 MobiDBLite consensus disorder prediction 83 115 - -
Dere07g0684 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dere07g0684 115 MobiDBLite consensus disorder prediction 91 105 - -
Dere07g0684 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Dere07g0684 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dere07g0684 115 Gene3D - 1 59 IPR038716 -
Dere07g0684 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Dere07g0684 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0684 Dere-ChrDere07 10196307 10197604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0684 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.348 5.78e-33 109