Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0657 ATGGAAGGAGCTAGATGCACACCCAAGTCAAGGCAAGAGTCTTGTTTAGGGATGGGTCCAAGGGGATTGGACAAGGACATGAAAATTGATGACAGTATCTTATTGTCATATGAGAATAGACATTTTCCGATTTTGTTGCTTGGCAAGAAGGAAGGCCTGGGTCGATCCATCCCTATTCCACTATCTTATATAACATTCCAATGGCCGCATGACACCCTAGCTAGGGTTTTGCCTGCGTCTCTTTCTGGAGAGAGATCTGTATCCGCTTTCTTGAAAAGGCCAAGTATCAAATATGAGTGTCTCTTAGTCGTGAATAAGCTTCAGAGTGATGCTCTAAGAGAAGCAATCTCAGGAATCATGGCGGATTCCAAGGAGAAAAATCGGAAGTTTGTGGAGACCATTGAACTTCAGATTGGGCTGAAAAACTATGATCCTCAGAAGGACAAGCGTTTTAGCGGTTCTGTGAAGTTGCCCCACATCCCTCGTCCCAAGATGAAAATATGCATGCTGGGAGATGCTCAACACGTTGAAGAGGCTGAGAAGATAGGGTTGGACTATATGGATGTGGAGGGACTGAAGAAGCTTAACAAAAATAAGAAATTGGTTAAGAAACTTGCGAAAAAATACCATGCCTTTTTAGCTTCTGAAGCAGTCATTAAGCAGATTCCTCGTCTTTTGGGTCCTGGTCTCAACAAAGCAGGGAAATTCCCCACGCTGGTTACTCACCAAGAATCTCTTGAGTCTAAGGTTAATGAGACCAAAGCCATGGTTAAATTTCAGCTAAAGAAGGTGCTTTGCATGGGAGTTGCTGTGGGGAATGTTAGTATGGAAGAAAAACAAATCTTCCAAAATGTACAAATGAGCGTTAACTTCCTTGTTTCCTTGTTGAAGAAGAATTGGCAGAATGTTAGGTGTTTGTATCTCAAGAGCACGATGGGAAAATCATATCGCGTCTTTTGA 960 0.426 MEGARCTPKSRQESCLGMGPRGLDKDMKIDDSILLSYENRHFPILLLGKKEGLGRSIPIPLSYITFQWPHDTLARVLPASLSGERSVSAFLKRPSIKYECLLVVNKLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0657 319 FunFam Ribosomal protein 240 317 - -
Dere07g0657 319 FunFam Ribosomal protein L10a 104 222 - -
Dere07g0657 319 Gene3D - 124 314 - -
Dere07g0657 319 Pfam Ribosomal protein L1p/L10e family 125 313 IPR028364 -
Dere07g0657 319 ProSitePatterns Ribosomal protein L1 signature. 219 238 IPR023673 -
Dere07g0657 319 SUPERFAMILY Ribosomal protein L1 107 319 IPR023674 -
Dere07g0657 319 FunFam Ribosomal protein 168 257 - -
Dere07g0657 319 CDD Ribosomal_L1 112 318 IPR028364 -
Dere07g0657 319 Gene3D - 168 257 IPR016095 -
Dere07g0657 319 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 114 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0657 Dere-ChrDere07 9693752 9697870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0657 104 319 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 88.426 3.57e-125 355