Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0642 ATGGAGGCTGCCCAACCTGGGTTTCGCTTCTACCCAACGGAAGAAGAGCTGGTTTCCTTCTATCTCCACCAGAAGCTGGAAGGCCAGAGACAGGACATGGACAGAGTCGTACCAGTTGTTGACATCTACGAAGTCGAGCCTTGGCACCTCCCAGGGCTTGCAGGGGAGGTGTGTCGAGGGGATCTAGAGCAGTGGTTCTTCTTCTCGCCGAGGCAAGAGAGGGAGGCGAGAGGAGGGAGGCCCAACAGAACCACGGCTTCAGGGTATTGGAAGGCCACGGGTTCTCCTGGTTACGTTTACTCTTCGGATAACAAAGTGATAGGGGTCAAGAAAACCATGGTTTTTTACAGAGGTAAAGCTCCCACCGGCCGGAAAACCAAGTGGAAGATGCACGAGTACAGAGCCATTCAACTCTCCAACTCTACCCATTCCACCAACGCCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTATGTGGTATCGGGAAGTTTCCGAGCATTTGATCGACGGCCATTAGAGGCGGGGCTTCAAGGGAGTACTGCTTCTGCTTCTGCAAGTACTGCTCATCGGGAAGGTGCAGTAGTGGAGAGATCAAGCTCGTCTGAAACTTCCAACTCAGGAGGAGATCAGCAAAACAATGCTGACGTTGCAGAAGCGGGAGGATCAAGCATTGGAAATCGGAATATCAATGATGGGATCGTAGAAGAGCCTTTGTGGGACTGGGAACAACTTGATTGGCTAAACTAG 756 0.5212 MEAAQPGFRFYPTEEELVSFYLHQKLEGQRQDMDRVVPVVDIYEVEPWHLPGLAGEVCRGDLEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNKVIGVKKTMVFYRGKAPTGRKTKWKMHEYRAIQLSNSTHSTNAIPTLRHEFSLCRVYVVSGSFRAFDRRPLEAGLQGSTASASASTAHREGAVVERSSSSETSNSGGDQQNNADVAEAGGSSIGNRNINDGIVEEPLWDWEQLDWLN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0642 251 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Dere07g0642 251 MobiDBLite consensus disorder prediction 180 232 - -
Dere07g0642 251 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Dere07g0642 251 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 201 - -
Dere07g0642 251 MobiDBLite consensus disorder prediction 179 232 - -
Dere07g0642 251 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Dere07g0642 251 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0642 Dere-ChrDere07 9506596 9507542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0642 7 249 NAC Transcription Factor Family AT5G22380 61.885 2.22e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g0642 NAM 2.1e-33 No_clan