Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0625 ATGGCTGGGGCGTCCAGGGAAACTCACAGTCACATGTCAATAGCAGCGTCCTCCATGTTTCCTGGCTTCAGGTTCTGTCCTACTGACGAGGAGTTGATTTCTTATTACCTCCAAAAGAAGCTTGATGGCCACCAAGACAGTGTCCAAATCATTTCCGAGGTTGAGCTTTGTCGATTTGAGCCTTGGGATTTACCAGACAAATCATTCATTCAATCAGATAACGAGTGGTTCTTCTTCTCCCCTCGCGGAAGAAAGTACCCAAATGGTTCACAGAGTAAGAGAGCAACTGAATGTGGCTATTGGAAAGCCACAGGAAAAGAGCGCAATGTAAAGGCAGGTTCTAATGTCATAGGTACAAAGCGTACTCTGGTTTTCCACCTTGGTCGTGCACCAAAAGGAGAAAGGACCGAATGGATCATGCATGAGTACTGCACCAACGACAAATCTCAGGATTCTATGGTTGTTTGTCGGCTCAAGAGGAACACAGAGTTCAGTTTGAACAAGGTTTCAAACACAGCTTCTTCAAGTCAAGTGCAGGCAGAGAATTCACACGAAAGTAATTGTGATGTCTCTGAAACTGATATTGATCAATTGGGTGTGTGTGAGCAAGATAAAAGAGTTGGGTGTAGTCCCAAGCTGAGTGGTAGTAGTTATGGTTCTCAATCTGCGGAACAAGTTGATTCTGTATCTGAATCCAGTCAAAGACCAGCTAATGATACTACTTTGACAGAATCTTCCAGTCTCAAAAAGGAGGTGGATGAAGAGGATTGCTATGCAGATATACTGAAGAATGATATAATCAAATTAGAAGAATCCTCTCTCACGCAAGAGGGTCACACAAGATTGCAGGATCCTCCGAGTCAGACGCTTCCTTTCCAAGGCACAGCACAACGGAGAATAAGATTAAGGGTTGACAAACCAAGGCATGATTACTCTTCTTCAAGAGTTCGTTTTCCATTCTCTAAGAACTCATCAAAGAATACCTTGTTTGCTAGAATGAGTGGCCCCACTTTGATGCTGTTCGTTTTGTTCTTCGTTCTAACCTTAATAGCTTTATTATATGTTGTTGTCATTGGGTTGGGTAGTCTCAAGTACACAAGGGAAACGTTGTGGGAAATTTGGTCACGTATGTAA 1134 0.4303 MAGASRETHSHMSIAASSMFPGFRFCPTDEELISYYLQKKLDGHQDSVQIISEVELCRFEPWDLPDKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKAGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCTNDKSQDSMVVCRLKRNTEFSLNKVSNTASSSQVQAENSHESNCDVSETDIDQLGVCEQDKRVGCSPKLSGSSYGSQSAEQVDSVSESSQRPANDTTLTESSSLKKEVDEEDCYADILKNDIIKLEESSLTQEGHTRLQDPPSQTLPFQGTAQRRIRLRVDKPRHDYSSSRVRFPFSKNSSKNTLFARMSGPTLMLFVLFFVLTLIALLYVVVIGLGSLKYTRETLWEIWSRM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0625 377 MobiDBLite consensus disorder prediction 170 190 - -
Dere07g0625 377 MobiDBLite consensus disorder prediction 211 249 - -
Dere07g0625 377 MobiDBLite consensus disorder prediction 170 186 - -
Dere07g0625 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 233 - -
Dere07g0625 377 ProSiteProfiles NAC domain profile. 19 161 IPR003441 GO:0003677|GO:0006355
Dere07g0625 377 SUPERFAMILY NAC domain 9 160 IPR036093 GO:0003677|GO:0006355
Dere07g0625 377 MobiDBLite consensus disorder prediction 213 245 - -
Dere07g0625 377 Gene3D NAC domain 28 165 IPR036093 GO:0003677|GO:0006355
Dere07g0625 377 Pfam No apical meristem (NAM) protein 21 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0625 Dere-ChrDere07 9404577 9406350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0625 10 288 NAC Transcription Factor Family AT2G27300 48.929 7.88e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g0625 NAM 2.2e-34 No_clan