Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0607 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCATTTGGAGCTGCTATTCTAGTTCATCATAAGGCCGAGAAGAAGAAATACGTATTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGATGCAGGAGATCTGCTCATCAAGAGATGGCTCTTATTGCCCGAATCCAGCACCCTTACATTGTGGAATTTAAGGAGGCATGGGTTGAAAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGCGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTCACTTTCCTGAGGAGAAACTCTGTAAGTGGTTTACCCAATTACTGTTGGCAGTGGAATACTTACATTCTAATTTTGTTTTACATCGCGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCATGATGTTCGCCTAGGGGATTTTGGGCTCGCTAAGACACTTAAAGCAGATGATCTGGCCTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAATTGCTTGCTGATATTCCTTATGGATTTAAATCTGATATTTGGTCACTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCGGGATTGATAAGCAAGATAAATCGTTCCTCCATTGGTCCTTTGCCTCCCTGTTATTCCCCATCCTTGAAAACACTGATAAAGGGCATGCTGAGAAAAAACCCAGAGCATCGGTCAACAGCATCTGAGATCTTAAAGCATCCGTATTTGCAATCTTATGTTGAGCAGTATCGTCCATCTTTCAGTCCTCCAACAGCCTGTTCTCCTGAAAAGCCAATATCCGCTGCCCATGATCCACGAAGAAATATGGCTGAAAGTCAAAACAGTAGCAGTTCAAGTTGTGACAAAGATAGTTTAATGTCAAACGACAGAAGCATTTCAACAGTGGCCAAAAAGTGTAATAACAAAGCCACTGAGACCGACCTGGCCTCTATTGATGATGAGGATGACTCTCAGCATCTTCTGCCTAGTGAAGAAGAAACTAGCTCCAGCGGTGGCAATGCCAAAGCAGATGGCCAAGAGGTGATGAAACCATCATATAATGAACAACGATCTATTGTTGAATCTAAGCAACCAAAAACAATTAAAAACATAATGATGGCAATAAAAGAAGGAAAAGTCAGAGAAAATGGTTCTCCAATGAGAGGCAATCGCATCAAGGTTGGTGGTACATCGACACAGAAAGCAAACACAGAGGCATTGCCTAAATTGCCCAAGTCTAATGCTGTTACTCCTAGTTTCAAGCCTAATTTAGAGTCTCCAACTGTTGCATCTGCAAAGACCTCCCCTGATATTACAAAACGAATGCAGGGGTCACATCCTTTAAAGAATCAGGTACTATTCATGATGGACTCTTCACCAAAAACTAAACCCAGACTTGATGGGACTCCCCCATCTGGTCCTATCAAACAAGAAGAAGGAGATGGAGTTTCTACTAAGCTGAGGCAAGGGACCCCCCCAAGCTTACTCAGACAGCCTTCATTTCGAGGAGGAATGCGGCAGGTCAGGCGTGATATTCCTAATGCAGCAAGTGATACAGAGAAGTTAGGTCCTAATAAAATACCTCAGGAGCCGTACATGAGTCAATGTCAGTTGCCCAATGGTCATATACCCCATGTTTCCGGAGAGATTACAGAGCCTCAGAAAGCTTTTGAAAAATGTTCCAAAGGAATGCAGACAGATAGCAGTAATTCTGTTTCATCTTCACTGTCTATTCAAGGATTTGAATTTTCTGATGATGCAACGAATTTCACTGACATGAGAGAACAGACACCTGCTGATCATGAGAGTGCAACTCACGTTGAAAGTGTAAAATCACATCATGACAGAAGCCCACCTGCTACCTATTTGCATTGTGAGATGGCTGAAAAGATATCAAGCGAAACTCCTGAACCCCCCTTGAATCTTCAGAATATAGTTACTTGTAATGAGAAAGTATGTTCCAGTTTAACTCCTGATCACCCTTTTCAAGATTCCAAGGAAGTGTTTGCTTCTGAAGAAGGTCTCCCAATCAATCAGACCAGTATATCTGCTGCCCCTTCTTGTGATAATAGATCTACAGATCCCTCTGTTAAAGCCATCAAAGAAATCAAAGATCTTCAAGATACTAATGAGCTAGTGACTTCAAACTGCTCTCTCAAACTTCCACTCATGAGTTCTGGAGAAAAATTAGTTTGTGAAGAAGTCACTCCAGCAAGCAAGCCCAATAATAGGCTTGATACAGTTACCCAGTCAAAACCTGTATGTATGTCCACTGGCGATGACAAGTTCACTGTAAGGGAAAGACTGTCATCAGTAGCTGAAATTGCCTCACCAATTACCTCTACCAATGGCCAGAAAGGATTGCAAGAAGAGAAAGGAAATGTCTTGCAAAATCCAATGACAGAAAGGCCAGCTGTTGGTAATCTTCCTCCAGCTTTTGACGACGTCATCCATGTTATACGGCATAGCAGTTACCGTGTTGGGACTGAGCAGCCAGTAAAGGAATCAGTGGAGATGGGAATTCAGAATGTGGATGTTGGTAAATTTCTCACTGTTGTAAGGGATGATTTAGAAATGAGAAACAAGAGCACTCCTCTGACCCTCAAATCTTCAAATTGCTCTGAAGCTCTGAGCTTGAAGTCTAGCCTTTCTGACCAATTAGAAGTGAGAAGCATGAACACTTCTCCAGCCCTTCAATCTTCGAGTTGCTCTGATGCTTTATGCACAAAGTCAAGTGTTACTGATCATTCTTGTGTCAATGAACAAGATGTGAGAAATCATGTTCCTCTAGTTTCAAAACCTGATTCCTCTGAGTTGACTAAATGTAACTCTTCAACAACCCAAGAGGAAACACCAGCAAAGGAAACTTTGGATGTTAAATCATTTAGGCAGAGAGCAGATGCTCTTGAAGGGCTTTTGGAGTTGTCTGCAGAGTTACTGCAGCAAAATAGGTTGGAGGAACTTGCAATTGTTCTAAAGCCCTTTGGGAAAGATAAGGTATCCCCAAGGGAGACAGCCATTTGGTTGGCTAAGAGCTTAAAAGGAATGATGAGCGAGGACAATGGGGGACGCTGTTCATGA 3138 0.4264 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVHFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRSTASEILKHPYLQSYVEQYRPSFSPPTACSPEKPISAAHDPRRNMAESQNSSSSSCDKDSLMSNDRSISTVAKKCNNKATETDLASIDDEDDSQHLLPSEEETSSSGGNAKADGQEVMKPSYNEQRSIVESKQPKTIKNIMMAIKEGKVRENGSPMRGNRIKVGGTSTQKANTEALPKLPKSNAVTPSFKPNLESPTVASAKTSPDITKRMQGSHPLKNQVLFMMDSSPKTKPRLDGTPPSGPIKQEEGDGVSTKLRQGTPPSLLRQPSFRGGMRQVRRDIPNAASDTEKLGPNKIPQEPYMSQCQLPNGHIPHVSGEITEPQKAFEKCSKGMQTDSSNSVSSSLSIQGFEFSDDATNFTDMREQTPADHESATHVESVKSHHDRSPPATYLHCEMAEKISSETPEPPLNLQNIVTCNEKVCSSLTPDHPFQDSKEVFASEEGLPINQTSISAAPSCDNRSTDPSVKAIKEIKDLQDTNELVTSNCSLKLPLMSSGEKLVCEEVTPASKPNNRLDTVTQSKPVCMSTGDDKFTVRERLSSVAEIASPITSTNGQKGLQEEKGNVLQNPMTERPAVGNLPPAFDDVIHVIRHSSYRVGTEQPVKESVEMGIQNVDVGKFLTVVRDDLEMRNKSTPLTLKSSNCSEALSLKSSLSDQLEVRSMNTSPALQSSSCSDALCTKSSVTDHSCVNEQDVRNHVPLVSKPDSSELTKCNSSTTQEETPAKETLDVKSFRQRADALEGLLELSAELLQQNRLEELAIVLKPFGKDKVSPRETAIWLAKSLKGMMSEDNGGRCS 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0607 1045 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 993 - -
Dere07g0607 1045 SUPERFAMILY Protein kinase-like (PK-like) 4 318 IPR011009 -
Dere07g0607 1045 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Dere07g0607 1045 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Dere07g0607 1045 MobiDBLite consensus disorder prediction 273 313 - -
Dere07g0607 1045 Gene3D Transferase(Phosphotransferase) domain 1 90 340 - -
Dere07g0607 1045 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0607 1045 CDD STKc_Nek 7 262 - -
Dere07g0607 1045 MobiDBLite consensus disorder prediction 401 462 - -
Dere07g0607 1045 MobiDBLite consensus disorder prediction 411 426 - -
Dere07g0607 1045 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Dere07g0607 1045 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0607 1045 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0607 1045 MobiDBLite consensus disorder prediction 293 313 - -
Dere07g0607 1045 MobiDBLite consensus disorder prediction 477 519 - -
Dere07g0607 1045 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Dere07g0607 1045 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Dere07g0607 1045 MobiDBLite consensus disorder prediction 332 382 - -
Dere07g0607 1045 MobiDBLite consensus disorder prediction 435 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0607 Dere-ChrDere07 9198494 9207083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0607 12 273 MAP Kinase Kinase Kinase AT3G06030 30.769 9.43e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Dere07g0607 Pkinase 1.1e-65 CL0016