Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0601 ATGGAAGGTATCCGTGCGAATATTGGCATTTTTGTCATTTTGTGCCTAATTACAGTGGGTTACGGTGCTACTGACCCAAATGATCTCAAAATTCTGAATGATTTCAAAAATGGTTTGGAGAATCCAGAGTTTCTCAAATGGCCAGACAATGGGGATGATCCTTGTGGCCCTCCTTCATGGCCTTACGTGTTCTGCTCTGGTAATAGAGTCACACAGATTCAGGCCAAGTCTCTGGGTCTTAAGGGTTCATTGCCTTCATCCTTTAACCAGCTCACAGAACTCTACAACTTGGGTCTTCAACACAACAAGCTTAGTGGGATGTTGCCTACTTTCAGCGGATTATCCAAATTGGAATTCGCTTTCTTAAATGACAATGAATTTGATGGAATCCCATCTGATTTCTTTAAGGGGCTTAGCAGTATTCGAGTTTTGTCTTTGGGAGAAAATCCATTGAATGCGAGTACTGGGTGGTCTCTTCCTGTGGATTTAGAAAAATCAGTACAATTGACGAATCTTTCCCTGGTGAATTGTGGTTTGGTTGGAAGACTGCCGGATTTTCTAGGCATATTGCCTTCTCTCACAAATTTGTTGCTTTCATACAACAGACTGTCTGGTAGCATTCCAGCAAGCTTTGGTCAGTCTTCTATGCAGGTTTTGTGGCTGAATAACCAAGATGGCGGCGGGATGAGCGGTCCTATCGATGTTATTGCTTCTATGACTTCGTTAACGCAGCTTTGGCTACATGGAAACCAGTTCACTGGGACAATTCCACAGAATATTGGAAGTCTAACTTCCTTGGTAGAGCTCAACCTTAATCGTAATCAACTTGTTGGCTTGATCCCAGAAACCCTGGCCAATATGAAACTCAAGATATTGGTGTTAGACAATAACAGGCTCATGGGTCCTCTACCAAAGTTTAAGACTGGGAATGTTTCTTATAATTTTAATTCCTTTTGTCAACCTAAGCCTGGCCTTGAATGTGCTCCTGAAGTTACTGCTCTACTGGATTTTCTCAGTAATCTGAATTACCCATCAGCGCTCACTTCTCAATGGTCTGGTAATGAACCATGTACTGGGCCATGGCTGGGATTGAGCTGCAATCCCAAGTCAGAGGTATCTATTATCAATTTTCCCCACCACAATCTCAATGGTACTCTAAGTCCCTCACTTGCTAAGTTAGTTTCACTCCTTGAAGTTAGGCTTGGAGGGAATAATTTAACTGGCAAAATTCCTAGCAGTTACACTGAATTGAAATCATTGAGGCTGGTGGATTTAAGTGATAACAATCTTGAGCCCCCATTGCCGAATTTTCCCGATGGTGTGAAGCTTATTATTCATGGTAACCCTCTTTTTGCTAACCAAACTGGAAGGAGTCCCCTACCTATCACCGGCCCACCACCTTCAAGTTCAGAATCTTCGCCTCATAACCCTCCTCCATCCTCTGAAAAGCCATCTTCCCCAAGTCAGAGTTCAAGCTCACATTCATCAAGTTCTGAACAAGTACAATCCCGTCAGAATGAATCTAAAAGATTTAAAACAATAGCAATAGTGACTGGAGCTGCAATTTTTGCACTTGTAGCTATATTGGTTATTTTCCTATTTATATATTGCTCAAAGAAGAAGCAGAAAACCTTACTGGACGAACCTAGTTCTATTGTGGTTCACCCTCAAGACCCATCGAATCCAGAGAATATGGTTAAAATTGCAGTATCAAATAACACTGCTGGAAGCTTATCAACAAAAACTGGAACAAGTTCTTTGAGTAACATTAGTGGTGAATCTGAGAATGTTCATGTAATTGATGCTGGTAACCTTGTCATAGCTGTTCAAGTTCTACGTAAAGTTACCAAGAATTTTGCTCCAGAAAATGAGCTAGGCCATGGTGGGTTTGGAACTGTTTATAAAGGTGAACTAGAGGATGGGACAAAAATAGCAGTGAAGAGAATGGAGGGTGGAGCTATAAGCAGTAAAGCACTGGATGAGTTTCAGGCTGAAATAGCTGTTCTTTCCAAGGTTCGTCACCGACATTTGGTCTCTCTGTTAGGATATTCCATTGAAGACAATGAAAGACTTTTGGTCTATGAATATATGCCTTTGGGTGCCCTAAGCAAGCATCTTTTTCATTGGAAAAGCCTGAAATTGGAGCCTCTGTCTTGGTCACAGAGGCTTGTGATAGCACTAGATGTTGCAAGAGGGATGGAATACCTCCATGGTCTTGCCCGCCAAACCTTCATCCACCGAGACCTTAAACCTTCTAATATTCTACTTGGTGATGATTTTAGGGCTAAAGTTTCAGATTTTGGTCTGGTGAAACTCGCCCCAGATGGTGAGAAGTCTGTGGTAACTAGGCTTGCTGGGACATTCGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAAAGTTGATGTATTCAGCTTCGGTGTGGTGTTGATGGAACTTCTGACTGGACTAACGGCTCTTGATGAGAGCCGGCCAGAGGAAAGCCGATACTTGGCTCAATGGTTTTGGCAGATTAAATCAAGCAAAGAAAAGTTTATGGCTGCCATTGATCCAGTTCTTGAGGCAGCTGAAGAGACTTTTGAGAGTATCTCCATTATAGCTGAACTTGCTGGACATTGCACTGCAAGGGATCCAAACCATCGTCCGGATATGGGTCATGCAGTCACTGTATTGGCAGCATTAGTAGAGAAATGGATACCAATTGTTGATGAATCAGATTCTTTTATCGGCATTGACTTCAGACAACCACTTTCCCAGATGTTGAAGGATTGGAAGGAAGCAGGAAGCAGAGATGTTAGCTATGCTAGCCTTGAAGACAGCAAAGGCAGTATACCAGCAAGGCCTGTTGGGTTTGCAGATTCCTTTTCTTCTGCCGATGCTCGATAA 2898 0.4262 MEGIRANIGIFVILCLITVGYGATDPNDLKILNDFKNGLENPEFLKWPDNGDDPCGPPSWPYVFCSGNRVTQIQAKSLGLKGSLPSSFNQLTELYNLGLQHNKLSGMLPTFSGLSKLEFAFLNDNEFDGIPSDFFKGLSSIRVLSLGENPLNASTGWSLPVDLEKSVQLTNLSLVNCGLVGRLPDFLGILPSLTNLLLSYNRLSGSIPASFGQSSMQVLWLNNQDGGGMSGPIDVIASMTSLTQLWLHGNQFTGTIPQNIGSLTSLVELNLNRNQLVGLIPETLANMKLKILVLDNNRLMGPLPKFKTGNVSYNFNSFCQPKPGLECAPEVTALLDFLSNLNYPSALTSQWSGNEPCTGPWLGLSCNPKSEVSIINFPHHNLNGTLSPSLAKLVSLLEVRLGGNNLTGKIPSSYTELKSLRLVDLSDNNLEPPLPNFPDGVKLIIHGNPLFANQTGRSPLPITGPPPSSSESSPHNPPPSSEKPSSPSQSSSSHSSSSEQVQSRQNESKRFKTIAIVTGAAIFALVAILVIFLFIYCSKKKQKTLLDEPSSIVVHPQDPSNPENMVKIAVSNNTAGSLSTKTGTSSLSNISGESENVHVIDAGNLVIAVQVLRKVTKNFAPENELGHGGFGTVYKGELEDGTKIAVKRMEGGAISSKALDEFQAEIAVLSKVRHRHLVSLLGYSIEDNERLLVYEYMPLGALSKHLFHWKSLKLEPLSWSQRLVIALDVARGMEYLHGLARQTFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVMGKITTKVDVFSFGVVLMELLTGLTALDESRPEESRYLAQWFWQIKSSKEKFMAAIDPVLEAAEETFESISIIAELAGHCTARDPNHRPDMGHAVTVLAALVEKWIPIVDESDSFIGIDFRQPLSQMLKDWKEAGSRDVSYASLEDSKGSIPARPVGFADSFSSADAR 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0601 965 MobiDBLite consensus disorder prediction 455 505 - -
Dere07g0601 965 Gene3D Transferase(Phosphotransferase) domain 1 697 909 - -
Dere07g0601 965 FunFam Receptor-like kinase TMK4 26 324 - -
Dere07g0601 965 SMART serkin_6 619 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0601 965 MobiDBLite consensus disorder prediction 460 484 - -
Dere07g0601 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Dere07g0601 965 FunFam receptor protein kinase TMK1 697 914 - -
Dere07g0601 965 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Dere07g0601 965 Pfam Leucine rich repeat N-terminal domain 329 367 IPR013210 -
Dere07g0601 965 FunFam receptor protein kinase TMK1 581 696 - -
Dere07g0601 965 ProSiteProfiles Protein kinase domain profile. 619 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0601 965 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Dere07g0601 965 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Dere07g0601 965 MobiDBLite consensus disorder prediction 485 505 - -
Dere07g0601 965 Gene3D Phosphorylase Kinase; domain 1 580 696 - -
Dere07g0601 965 PANTHER OSJNBA0070M12.3 PROTEIN 11 965 - -
Dere07g0601 965 SUPERFAMILY L domain-like 329 440 - -
Dere07g0601 965 SUPERFAMILY Protein kinase-like (PK-like) 604 895 IPR011009 -
Dere07g0601 965 Pfam Protein tyrosine and serine/threonine kinase 622 892 IPR001245 GO:0004672|GO:0006468
Dere07g0601 965 CDD STKc_IRAK 625 895 - -
Dere07g0601 965 SUPERFAMILY L domain-like 24 305 - -
Dere07g0601 965 Gene3D Ribonuclease Inhibitor 26 323 IPR032675 -
Dere07g0601 965 MobiDBLite consensus disorder prediction 942 965 - -
Dere07g0601 965 SMART LRR_typ_2 239 262 IPR003591 -
Dere07g0601 965 SMART LRR_typ_2 138 166 IPR003591 -
Dere07g0601 965 SMART LRR_typ_2 114 137 IPR003591 -
Dere07g0601 965 SMART LRR_typ_2 263 286 IPR003591 -
Dere07g0601 965 SMART LRR_typ_2 417 440 IPR003591 -
Dere07g0601 965 SMART LRR_typ_2 190 214 IPR003591 -
Dere07g0601 965 SMART LRR_typ_2 91 113 IPR003591 -
Dere07g0601 965 FunFam Leucine-rich repeat receptor-like kinase 329 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0601 Dere-ChrDere07 9151668 9155350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0601 82 900 Receptor kinase-like Gene Family AT5G07280 31.535 8.53e-84 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dere07g0601 PK_Tyr_Ser-Thr 1.8e-45 CL0016