Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0588 ATGGATGTCGATTCCTCGATGGTGCCGGAAACCGATCACGATCCAGTCGTGCAGAACAATAGCACTGCTCAGTCTCCTGCAGCAATGGAGAGGGAGCAGCCGGCGCCAACAGGCGGATCTCCAGCGACTGCTCAGTCGCCGGTGCAGCAGCAGCATGCGTCTTCTCAGGCTCAGCAGAGTCCCGTGGTTGGACCAAGGCTCGCGCCAACTTACTCTGTAGTGAATGCAATTATAGAAAAGAAGGAGGACGGACCAGGGCCTAGGTGTGGCCACACCTTGACTGCGGTGGCAGCTGTTGGAGAGGAGGGTACACCTGGGTACATTGGCCCAAGGCTGATTTTGTTCGGTGGCGCCACTGCACTTGAAGGGAATTCTGCGGCTTCTGGGACTCCTTCGTCCGCTGGAAATGCTGGAATCCGTTTAGCTGGTGCCACGGCTGATGTCCATTGTTATGATGTCTTAACCAATAAATGGTCCAGGATAACTCCCTTTGGAGAACCTCCAACCCCTAGGGCTGCTCATGTGGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAAGACCTTCATGTTCTTGATCTCACTCAACAACGGCCACGGTGGCATAGAGTTGTTGTTCAGGGCCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTTGGGCAGAGGTATCTGATGGCTATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTACGCAACCGCTAGTGCACGCTCTGATGGGCTTCTTTTGCTTTGTGGAGGGAGGGATGCCAATAGTGTGCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGGGATGGCCGTTGGGAATGGGCAATTGCTCCTGGTGTCTCACCATCACCAAGATATCAGCATGCTGCGGTATTTGTTAATGCAAGGCTACATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTAGAAGACTCATCAAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGGACAGGTAGATACAGTGCCGATGCAGCTGGTGGGGATGCCTCAGTTGAGTTGACTCGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGCGACCTAATTTTCATTTATGGTGGTTTACGTGGTGGAGTATTGCTGGATGACCTCCTTGTTGCTGAAGATCTTGCTGCAGCTGAAACAACAACTGCTGCTTCGCATGCTGCTGCAGCAGCCGCTGCAACTAATTTACAAGCTGGACGTTTACCTGGACGATATGGATTTGTTGATGATAGGACAAGGCAAACAATGTCTGAAACAACTGCTGATGGTGCAGTTGTTCTGGGAAATCCAGTTGCTCCACCTATAAATGGTGACATGTATACTGATATTAGCACTGAAAATGCCATGCTTCAGGGATCTAGGAGAACAAGCAAAGGTGTTGAATATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATTAGTGCCACATTGGCTGCTGCGAAGGCACGGCAGGTGAATGGAGAAGTTGGAGAAGTTGATTTGCCTAACAGAGATGGCGGGAATGAGGCTACTCCAAGTGGGAAACCTATATCTTCCTTGATTAAACCTGATTCTACGGGGTCAAATAATATTGCTCCTGGTGGAGTTAGACTGCATCATAGAGCTGTGGTTGTTGCTGCTGAGACTGGTGGAGCATTAGGTGGGATGGTCAGACAGCTTTCCATTGATCAGTTTGAAAATGAAGGCAGGCGGGTCAGTTATGGAACACCAGAAAATGCAACTGCAGCTAGAAAATTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGAGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTAGACTGCAATGAAATTGCGGATCTTTGTGATAGTGCAGAGCGCATATTTTCAAGTGAACCAAGTGTCCTACAACTTAGAGCACCTATTAAAATATTTGGTGATTTACATGGTCAATTTGGGGATCTCATGCGTCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGAGGCCAACACAGCCTGGAAACTATAACCCTTCTGCTTTCTCTGAAGGTTGAGTATCCGAACAATGTGCATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATCGAGAGGATGGGTGAGAGAGATGGAATATGGGCATGGCATCGTATAAATCGTTTGTTTAATTGGCTTCCTCTGGCCGCTCTAATTGAGAAAAAAATCATTTGCATGCATGGGGGTATTGGACGTTCAATTAATCACGTGGAACAGATTGAGAACATTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGTCTACGACCTAATGCTAGAGGTCCAGGATTAGTTACTTTTGGGCCTGATCGTGTGATGGAATTTTGCAATAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGATTTGAGCGTTTTGCCCAGGGACATTTGATAACACTTTTCTCAGCTACAAACTACTGTGGTACTGCAAATAATGCCGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAGCTGATTCATCCATTGCCACCTGCGATTTCTTCACCAGAAACATCACCGGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACGCCAACTAGAGGTCGACCTCAAGTAGCAAATGACCGAGGCTCTCTTGCTTGGATATAG 3018 0.4781 MDVDSSMVPETDHDPVVQNNSTAQSPAAMEREQPAPTGGSPATAQSPVQQQHASSQAQQSPVVGPRLAPTYSVVNAIIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAATNLQAGRLPGRYGFVDDRTRQTMSETTADGAVVLGNPVAPPINGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVGEVDLPNRDGGNEATPSGKPISSLIKPDSTGSNNIAPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLSLKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0588 1005 Gene3D - 68 191 IPR015915 GO:0005515
Dere07g0588 1005 Gene3D - 192 307 IPR015915 GO:0005515
Dere07g0588 1005 MobiDBLite consensus disorder prediction 38 65 - -
Dere07g0588 1005 PIRSF STPPP_BSU1 29 1005 IPR012391 GO:0004721|GO:0009742
Dere07g0588 1005 Gene3D - 638 977 IPR029052 -
Dere07g0588 1005 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1005 - -
Dere07g0588 1005 SMART pp2a_7 674 958 IPR006186 GO:0016787
Dere07g0588 1005 SUPERFAMILY Kelch motif 143 432 IPR015915 GO:0005515
Dere07g0588 1005 FunFam Serine/threonine-protein phosphatase 268 468 - -
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 898 918 IPR006186 GO:0016787
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 808 834 IPR006186 GO:0016787
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 702 729 IPR006186 GO:0016787
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 737 764 IPR006186 GO:0016787
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 838 865 IPR006186 GO:0016787
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 920 936 IPR006186 GO:0016787
Dere07g0588 1005 PRINTS Serine/threonine phosphatase family signature 770 794 IPR006186 GO:0016787
Dere07g0588 1005 SUPERFAMILY Metallo-dependent phosphatases 659 965 IPR029052 -
Dere07g0588 1005 ProSitePatterns Serine/threonine specific protein phosphatases signature. 771 776 IPR006186 GO:0016787
Dere07g0588 1005 Pfam Kelch motif 329 375 IPR011498 GO:0005515
Dere07g0588 1005 MobiDBLite consensus disorder prediction 566 580 - -
Dere07g0588 1005 MobiDBLite consensus disorder prediction 981 1005 - -
Dere07g0588 1005 Pfam Galactose oxidase, central domain 223 276 - -
Dere07g0588 1005 MobiDBLite consensus disorder prediction 1 65 - -
Dere07g0588 1005 FunFam Serine/threonine-protein phosphatase 638 978 - -
Dere07g0588 1005 Pfam Calcineurin-like phosphoesterase 702 909 IPR004843 GO:0016787
Dere07g0588 1005 MobiDBLite consensus disorder prediction 551 580 - -
Dere07g0588 1005 CDD MPP_Bsu1_C 654 956 IPR041758 -
Dere07g0588 1005 FunFam Serine/threonine-protein phosphatase 67 264 - -
Dere07g0588 1005 MobiDBLite consensus disorder prediction 12 28 - -
Dere07g0588 1005 Gene3D - 311 458 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0588 Dere-ChrDere07 8980986 8994095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0588 666 901 Calmodulin-binding Proteins AT5G63870 29.412 1.84e-26 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0874 08 12581203 12592869 Dere07g0588 07 8980986 8994095 CCT
Dere07g0588 07 8980986 8994095 Dere07g0588 07 8980986 8994095 ECH