Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0583 ATGGGTGTCTCAGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGCCAGAGTCTTCAGAGAAGGATGGAAATAGGACTGGAAAATTGCGGCATCAGAGGAAACATTCCATCAAAATTGACAATGACAAACTCCAAAATGAGTTTAACCATGATGCTACTCCTATTGGAGATGCCAATTTCCTTTCTCACACTGATGCCCAACATTCACCTTCTACTTCACAACAAGCGCAGGATGCTGCATATAGCCATCAAATTATGAGGGAGGAATGGGCGGCAACACGCATTCAAACAGCCTTCCGAGGATTTTTGGCCAGAAGGGCACTACGAGCTTTGAAAGGATTGGTAAGACTTCAGGCCCTTGTAAGAGGTCATGCCGTAAGAAAACAAGCTGCTATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGTGTTCGAGCAAGGCGTGTTCGCATAGCATTGGAAAGTCAATCAGTACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCATGTTCGGGAAATAGAAGAAGGTTGGTGTGACAGCGTGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAGAGAAAGGAGGCTGCAGCTAAACGTGAGAGAGCAATGGCATATGCTCTGGCTCATCAGTGGCAGGCAGCATCAAGGCAGCAGGCTGCTTCATCTGGATTTGAACCAGATAAGAGTGGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAATCGCTTTCTTGACATTAATACAAGGGATGGAGTAATGGTATGTGAAAATGGAGCAGTGGAAGGTAAAAATGGAATCAGATCTCAACTAAGATCTGCAAGCAAGAAATCAGTTCCATCAAATATTCATCCAAACCTTACTAGTCAGAAAACCGGTCCGTCTCTTTCTGATGGCTGTGATTCTTCACCTAGTAAGTCAGCAGGTTTGCTGGAGGCGTCAAACACACAGATCACTAAGCCAAAATCTAATGCAAATGTTGAAAGTCCTATTGAAGAAGCCAACTCAAGGCCTGGACTTGGTTCAAGATCTCATAGTAATCCGAAGGAGAGAATTACACAAGCTGATAAACAGGCAAAGAAACGGTTATCTCTGCCAAACAATGCAGGGGGAGGTCCTGGGGCTCAAACAGCCAGAAATCCTGCAAGAACTAATGTCAAGGGGACAACCAGCACGCAAAAGCCTCTCAGGGACAAACCTAAGCTCAATGGAAGAGGGGATGTGAATCCGACAAAATCTGTTACTCACCCCATGGAGATATAG 1311 0.4477 MGVSGKWIKALVGLKKSEKPESSEKDGNRTGKLRHQRKHSIKIDNDKLQNEFNHDATPIGDANFLSHTDAQHSPSTSQQAQDAAYSHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSVQQKLQQQLANEAHVREIEEGWCDSVGSVEEIQAKLLKRKEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGKNGIRSQLRSASKKSVPSNIHPNLTSQKTGPSLSDGCDSSPSKSAGLLEASNTQITKPKSNANVESPIEEANSRPGLGSRSHSNPKERITQADKQAKKRLSLPNNAGGGPGAQTARNPARTNVKGTTSTQKPLRDKPKLNGRGDVNPTKSVTHPMEI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0583 436 MobiDBLite consensus disorder prediction 14 31 - -
Dere07g0583 436 MobiDBLite consensus disorder prediction 282 436 - -
Dere07g0583 436 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Dere07g0583 436 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Dere07g0583 436 MobiDBLite consensus disorder prediction 59 84 - -
Dere07g0583 436 Gene3D - 93 134 - -
Dere07g0583 436 MobiDBLite consensus disorder prediction 14 40 - -
Dere07g0583 436 MobiDBLite consensus disorder prediction 64 84 - -
Dere07g0583 436 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Dere07g0583 436 PANTHER IQ-DOMAIN 5-RELATED 1 387 - -
Dere07g0583 436 SMART iq_5 91 113 IPR000048 GO:0005515
Dere07g0583 436 SMART iq_5 114 135 IPR000048 GO:0005515
Dere07g0583 436 MobiDBLite consensus disorder prediction 284 347 - -
Dere07g0583 436 MobiDBLite consensus disorder prediction 386 413 - -
Dere07g0583 436 FunFam IQ-domain 11 91 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0583 Dere-ChrDere07 8941576 8948961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0583 1 421 IQD Protein Family AT3G22190 57.647 2.39e-127 373