Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0575 ATGTCAATGGAAATGATGGCAACTGAACGTGTTTGTTTTGTTCCCTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCAGTTTACTAACCATGGTGACGGTTAGATGTGGGCATTGTGCAAATTTTCTATCAGTTAACATGGGTGCTTCACTTCAAGCGCTTCCTCCTCATCAAACTCACTCTCAGCCACAGAAGCAACATCAGACTTTTGAAGAATCAAGCAACAAGGATATGGGATCATCTTCAAAAAGCAACAAATTTGCTCCATTTGAGTCTCTAGAGCATGAGCAACCTAGGATTCCTCCGATTCGCCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAAGAAATCCAAAGGATTAAGGCTAGCAATCCAGATATCAGCCACAGGGAGGCTTTTAGCACTGCAGCCAAAAATTGGGCACATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGGAACAAGCAAGCAAAGTTGGACCAGGGGGAGGGAACTTAA 534 0.4401 MSMEMMATERVCFVPCNFCNTILAVSVPCSSLLTMVTVRCGHCANFLSVNMGASLQALPPHQTHSQPQKQHQTFEESSNKDMGSSSKSNKFAPFESLEHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0575 177 CDD HMG-box_SF 115 151 - -
Dere07g0575 177 PANTHER PROTEIN YABBY 6-RELATED 1 170 IPR006780 GO:0007275
Dere07g0575 177 MobiDBLite consensus disorder prediction 57 92 - -
Dere07g0575 177 Gene3D High mobility group box domain 99 157 IPR036910 -
Dere07g0575 177 Pfam YABBY protein 7 161 IPR006780 GO:0007275
Dere07g0575 177 FunFam Axial regulator YABBY 106 175 - -
Dere07g0575 177 MobiDBLite consensus disorder prediction 57 116 - -
Dere07g0575 177 MobiDBLite consensus disorder prediction 93 110 - -
Dere07g0575 177 SUPERFAMILY HMG-box 105 154 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0575 Dere-ChrDere07 8834822 8840147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0575 1 173 C2C2-YABBY Transcription Factor Family AT1G08465 67.232 7.56e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dere07g0575 YABBY 2e-71 CL0114