Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0568 ATGGAGGGCCCTGGTATGGAAGAGAATAGTAAGCCCGAGGCACATTTGACTTCAGCAGCCGCTTTTGTGGAGGGTGGAATACAGGACGCTTGTGACGACGCTTGCAGCATATGTCTTGAAGCCTTCTGTGATAGTGATCCTTCAACGGTGACAAGTTGCAAGCACGAGTTTCATCTTCAATGCATTTTGGAATGGTGTCAGAGAAGCTCCCAGTGTCCTATGTGTTGGCAGCCCATCAGTCTTAAAGATCCAACCAGCCAGGAATTGCTTGAGGCAGTGGAAAGAGAGAGGAACTTTAGGTTCAATCCATCTAGAAATGCCACAATATTTCGTCATCCAACTCTTGGGGATTTTGAGTTGCCACATTTGCCAGTTGGCGCTAATGATGTTGATCTTGAGGAGCGTATAATCCAACACTTGGCTGCTGCTGCTGCAATGGGGCGAGTGCGTCATATTGCTAGAAGCGAAGGCCAGAGAAATAGATCATCAGGTCAAGGTCACCCACAGTTCTTGGTATTTTCAAGTCATTCTAATTCACCTCCTGTGGCTCCTACTTCTTCCTCTACAACTCAGAGGGAGAATGGTGAACCAACTCCTGCAATTGCAGTTTCCACACTATCTCCTATTTACACAACTGGAGAAGAATCAACGCCGCCGACACCAGTTCCTCTTGTTCAAGCTGACCAAGTTTCTGCCTCTGGATCTGGATCTACTGCTCTTGTTGCCGATCACGAAGGATCATATTACAACAATAGGAGATCTTGTGAGTTATCCCCAACATCTAGTAGTCAAGACAGAACTGGGCCGTCAGACTTCCAATCATTTTCAGAATCTCTGAAGTCTAAGCTAAATGCAATGTCAATAAGATACAAAGAGTCAATTTCCAAGAGCACTAGAGGGTGGAAGGAGAGATGGTTCTCTCGCAACTCCTCCATTTCTGATCTGGGATCTGAAGTGAGACGGGAGGTTAATGTAGGAATTGCAACTGTGTCACGCATGATGGAACGTCTGGAAGCCAGAGACATTCAAATTAAGCATATAGAGAAAATTGCATTAACTCTTAGCTTTGTTTTGTCAAAAAGTATGGTGTGTTGCATATTGGCTAGTGCAGGCCAGGAAAGTGATAAACCGTTTACCTTGCAGAAGATGACCAAGGTTTGTGATATTGGAAATAAAGAACCTAGAAAAGGCAGAAATGGTCCTTGCTTGTTTAGAACTTTGGAGCTTATATGTATTATTGTAAATCACGTGTAA 1254 0.4426 MEGPGMEENSKPEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFRHPTLGDFELPHLPVGANDVDLEERIIQHLAAAAAMGRVRHIARSEGQRNRSSGQGHPQFLVFSSHSNSPPVAPTSSSTTQRENGEPTPAIAVSTLSPIYTTGEESTPPTPVPLVQADQVSASGSGSTALVADHEGSYYNNRRSCELSPTSSSQDRTGPSDFQSFSESLKSKLNAMSIRYKESISKSTRGWKERWFSRNSSISDLGSEVRREVNVGIATVSRMMERLEARDIQIKHIEKIALTLSFVLSKSMVCCILASAGQESDKPFTLQKMTKVCDIGNKEPRKGRNGPCLFRTLELICIIVNHV 417
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0568 417 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 21 84 - -
Dere07g0568 417 MobiDBLite consensus disorder prediction 251 275 - -
Dere07g0568 417 SUPERFAMILY RING/U-box 28 83 - -
Dere07g0568 417 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Dere07g0568 417 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Dere07g0568 417 Pfam Ring finger domain 34 75 IPR001841 -
Dere07g0568 417 MobiDBLite consensus disorder prediction 154 198 - -
Dere07g0568 417 SMART ring_2 35 75 IPR001841 -
Dere07g0568 417 MobiDBLite consensus disorder prediction 158 198 - -
Dere07g0568 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 84 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere07g0568 Dere-ChrDere07 8730656 8734051 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0568 32 83 C3H Transcription Factor Family AT4G00335 44.231 9.95e-11 58.9