Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0565 ATGTATAACGCTATGATGGATCCTGAGCTGATCCGAATCGCTCAGGAGCAGATGAGTCGCATGTCACCCGCCGAATTGGCTCGGATCCAACAGCAGATGATGTCTAATCCAGAGTTATTGAGGATGGCGTCAGAAAGCATGAAGAACATGAGACCTGAAGACTTCAAATATGCTGCAGAGCAGTTAAAGCATACCTGTCCGGAACAGATGGCTGAGATTGGTGAGAAGATGGCTAATGCAACACCTGAAGAAATTGCAGCTATTCGTGCCCGTGCTGATGCCCAGATCAAATATGAAATAAATGCGGCTGAGATGTTGAAGAAGCAGGGGAACGAACTTCACAGTCAGGGAAGGTTCCATGATGCTATGCAGAAGTATTCTCTTGCTAAGCAAAACATTAAAGAAATTCCATATTCCCAAAGTGGAAAGCTTCTTTTGGCATGCTCACTCAACTTGATGTCTTGTTACTTGAAGACAAGGCAGTATGATGAATGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCAAAGAATCTTAAAGCTCTTTTTCGAAGAGGTCAAGCATATAAGGAACTAGGTCTACTGAAGGATGCTGTTAATGATTTGAGCATGGCATATGAAGTTTGCCCTGATGATGAAACTGTTGCAGAACTTTTAAGGGAGACCAAGGAAATGTTGTCAAAGGAAGGTGGTGAGCATGCATCTAGAAAATTAGTAATTGAAGAAATAACTGAAGAAGTTGAGAATGTGCCTTCTGGGAACTTTGGAAGCTCATCTGTGGAGCAAACAGTGGCTCAGCCCAAAAAATCCAATGACTCTTCTAAGAATTGCAGTACAGTCAGCAATGGAAATTTGAACTCAAATATGGAGGGTTCAGATACTTTGAAGAATGACCCAGAAACTATCAGATCATTTCAAAATTTCATTTCAAATGCCGATCCTGCCACTCTAGCTTCTTTGAATGCTGGACAGTCGAAAGATGTGTCTCCTGATATGATTAGAACGGCCACAAATATGATTAGCAAGATGTCACCTGAGGAACTGCAAAAAATGCTTGACATGGCTTCTTCATTTCAGGGGGATAACCCATTTTTAAGAGGTTCCCCTGATTCTACTTTTAACCCTGGATCAATTCCTCCTAATGTGACTCCTGACATGTTCAAAACAGCCTCTGATACGATGAGTAAAATGCCACCAGAGGACCTTCAAAAGATGTTTGAAATGGCATCCTCATTGTCAGGGAAAGCATCTATTCCATCATCCGCTGCTGTAGACAAGAATTTGAGAAATGCTTCCCAGTCAAACATACCCTCCTCGAGTGGTGGAAATAATGCTCTTGATGAATTGATTTCTTCTCGTGATTCCTTTTTAAATATGAGAAATGCTTCTCGGTCAAACTTCCCATCCTCAAGCACTGATTTTCAAGAACAGATGAGAAACCAGATGAAAGATCCAGAAATGCGGCAGATGTTCACATCAATGATTAATAATATGAGCCCAGAAATGATGGCAAACATGGGCGAACAATTTGGTTTCAAGCTTTCAAAAGAAGAGGCAGCAAAAGCTCTGAATGCCATGTCGTCCTTGTCGCCAGAGGGCTTGGATAAAATGATGCGATGGGCTGACCGGATTCAAAGAGGAGTTGAAGGTGCAAAAAAGACAAAGAACTGGTTGCTAGGGAAACCTGGTTTGATATTGGCAATAGTCATGCTCATTTTGGCCGCAATTCTTCATCGGCTGGGCTTCATTGGTGGCTAG 1761 0.4208 MYNAMMDPELIRIAQEQMSRMSPAELARIQQQMMSNPELLRMASESMKNMRPEDFKYAAEQLKHTCPEQMAEIGEKMANATPEEIAAIRARADAQIKYEINAAEMLKKQGNELHSQGRFHDAMQKYSLAKQNIKEIPYSQSGKLLLACSLNLMSCYLKTRQYDECIKEGSEVLAYDAKNLKALFRRGQAYKELGLLKDAVNDLSMAYEVCPDDETVAELLRETKEMLSKEGGEHASRKLVIEEITEEVENVPSGNFGSSSVEQTVAQPKKSNDSSKNCSTVSNGNLNSNMEGSDTLKNDPETIRSFQNFISNADPATLASLNAGQSKDVSPDMIRTATNMISKMSPEELQKMLDMASSFQGDNPFLRGSPDSTFNPGSIPPNVTPDMFKTASDTMSKMPPEDLQKMFEMASSLSGKASIPSSAAVDKNLRNASQSNIPSSSGGNNALDELISSRDSFLNMRNASRSNFPSSSTDFQEQMRNQMKDPEMRQMFTSMINNMSPEMMANMGEQFGFKLSKEEAAKALNAMSSLSPEGLDKMMRWADRIQRGVEGAKKTKNWLLGKPGLILAIVMLILAAILHRLGFIGG 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0565 586 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 363 - -
Dere07g0565 586 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Dere07g0565 586 SMART tpr_5 180 213 IPR019734 GO:0005515
Dere07g0565 586 SMART tpr_5 103 136 IPR019734 GO:0005515
Dere07g0565 586 SMART tpr_5 146 179 IPR019734 GO:0005515
Dere07g0565 586 MobiDBLite consensus disorder prediction 251 300 - -
Dere07g0565 586 Gene3D Tetratricopeptide repeat domain 89 236 IPR011990 GO:0005515
Dere07g0565 586 SUPERFAMILY TPR-like 96 228 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0565 Dere-ChrDere07 8715029 8720458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0565 100 227 Calmodulin-binding Proteins AT5G48570 33.577 3.30e-13 70.5