Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0551 ATGGCCAGAGGGGGTGGACTCTCGATTGATTCAGATCCAGTTGGGAGCTTCTTCCTCCCCAATCCAATTATTCTCAACTCTTTTCCTTCTGAAGAGACCCATCAAACCGACTGCAAGCTTGAACCCATGGACAGTACTTTCATCCCCTTCCAACTCAGAAGAACCATCGATGAGATGGACTTCTTCTCTAACAAGAATGACAGGGCTTCCTCTGTCACTGCCAAGGCTGATACATCTGCTCCTCCAGATGCGGTTGAAGTCAAAGTGAACACTGGTCTGAATCTCTTGACTACTAGCAGCGACCACTCTATGATGGACGACATATCTCCTAATTTCAAGGATAGAAGAGCCAGGAGTGAGGTGGCTGTTCTTCAAGCTGAGGTAGAGAGAATGACAGGGGAGAATCATAGGCTAAGGGACAGGCTCGAAGAGGTTAGCACCAATTACAATGCCCTGAAGATGCATATAATGAATTGGATGCAGTGTCAGATGGGTAGTGAGGAGGACGATGAAAAACATGAGAACAAGGTGCTTGACAGAAGTGCTGCAGAAAAGAAACAAACTGGGAATAGCAGAGGAAGCTTAGTGCCAAGACAGTTTATAGATCTTGGATTGGCTTCAACTCATAATGGTGAGACAGATGAGCGTTCTTTCTCTTCATCCGCAGGACGAAGTCATGACAGGTCAGGATCACCTGGAAATAACGTGGAAGTGGCTTCCAAGGAATGTGGTGCCATAACTGATCAAGACAAGAAGGACTCCGGTAAGGGAACTGAAATGGAAGTAGATGCTGATAAGATTCCAAAGTTCAGTCCTCCAAAGAACGTTGATGATCAAGTGGAGGCCACCATGAGAAAGGCAAGAGTTTCAGTCAGAGCTCGATCTGAGGCACCCATGATTAGTGATGGATGTCAATGGCGAAAGTATGGGCAAAAGATGGCCAAAGGAAACCCATGCCCTCGAGCTTATTATCGATGTACCATGGCTGCAGGTTGCCCCGTCAGGAAACAGGTACAAAGGTGTGCGGAGGATCGAACAATTCTTGTAACAACATACGAAGGGAATCACACCCACGCATTGCCTCCGGCGGCGATGGGGATGGCGCAAGCAACATCAACGGCGGCGAAGATGCTGCTTTCAGGATCAATGACAAGCAGCGATGGCCTAATGAACGCAAGCTTCCTGACGAGGACGGCACTGCTTCCATGTTCTTCAAGCAGCATGGCGACGCTCTCAGCCTCAGCTCCATTCCCAACAGTGACACTGGACTTAACTTGCCCCCCAACAAGCCACCCTGAAACCCAGTTCCAAATGCCCTTCACAAATGGCCCTCACACTTTTGCTCAAGCACTGGCTCACGCACTCTATAATCATAACCACTCAAACTTTTCTGGGCTTCAAATGGATCATAGTAAAGACCCTTCACAGTTGAGTGCTGCCATAGCTGTTGACCCCAACCTCACTGCAGCTCTAGCGGCGGCTATTACTTCCATTATCGGTGCCGCTCTGCCAAACAACATTAATGGCGACAGTAATGGCAATGCTACAACTAGCAACAACAATAATTCCAACTTTCCAGGGAACTAG 1587 0.482 MARGGGLSIDSDPVGSFFLPNPIILNSFPSEETHQTDCKLEPMDSTFIPFQLRRTIDEMDFFSNKNDRASSVTAKADTSAPPDAVEVKVNTGLNLLTTSSDHSMMDDISPNFKDRRARSEVAVLQAEVERMTGENHRLRDRLEEVSTNYNALKMHIMNWMQCQMGSEEDDEKHENKVLDRSAAEKKQTGNSRGSLVPRQFIDLGLASTHNGETDERSFSSSAGRSHDRSGSPGNNVEVASKECGAITDQDKKDSGKGTEMEVDADKIPKFSPPKNVDDQVEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHTHALPPAAMGMAQATSTAAKMLLSGSMTSSDGLMNASFLTRTALLPCSSSSMATLSASAPFPTVTLDLTCPPTSHPETQFQMPFTNGPHTFAQALAHALYNHNHSNFSGLQMDHSKDPSQLSAAIAVDPNLTAALAAAITSIIGAALPNNINGDSNGNATTSNNNNSNFPGN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0551 528 FunFam probable WRKY transcription factor 31 285 362 - -
Dere07g0551 528 SUPERFAMILY WRKY DNA-binding domain 293 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere07g0551 528 MobiDBLite consensus disorder prediction 210 236 - -
Dere07g0551 528 ProSiteProfiles WRKY domain profile. 295 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere07g0551 528 MobiDBLite consensus disorder prediction 165 258 - -
Dere07g0551 528 MobiDBLite consensus disorder prediction 244 258 - -
Dere07g0551 528 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 103 513 IPR044810 GO:0003700
Dere07g0551 528 SMART WRKY_cls 300 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere07g0551 528 MobiDBLite consensus disorder prediction 165 186 - -
Dere07g0551 528 Pfam WRKY DNA -binding domain 302 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere07g0551 528 Coils Coil 121 148 - -
Dere07g0551 528 Gene3D WRKY domain 285 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0551 Dere-ChrDere07 8547143 8549187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0551 53 512 WRKY Transcription Factor Family AT1G62300 46.535 1.26e-113 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere07g0551 WRKY 3.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0857 08 12340263 12344005 Dere07g0551 07 8547143 8549187 CCT
Dere07g0551 07 8547143 8549187 Dere07g0551 07 8547143 8549187 ECH